|
Name : Sbal175_3446 (Sbal175_3446) Accession : YP_006021986.1 Strain : Shewanella baltica BA175 Genome accession: NC_017571 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 4092260 - 4094254 bp Length : 1995 bp Strand : - Note : SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: spc:Sputcn32_0872 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal DNA sequence : ATGTCTTCCCGTAAAGTACTCGCAAACGCAATCCGTGCGTTAAGTATGGATGCAGTTCAAAAAGCAAATTCAGGCCATCC CGGCGCCCCAATGGGTATGGCAGATATTGCTGAAGTGCTGTGGAATGATTTCCTTAAGCACAACCCGACCAATCCTAAAT GGGTAGATAGAGACCGTTTCGTCCTTTCTAACGGTCACGGTTCAATGCTGATCTACTCTTTACTTCACCTGACAGGTTAT GAATTACCAATCGAAGAACTGAAACAGTTCCGTCAATTGCATTCAAAAACCCCGGGTCACCCAGAATACGGTTACACCCC AGGTGTTGAAACCACAACGGGTCCACTCGGCGCGGGCATCAGCAATGCTGTCGGTATGGCGATTGCTGAAAAAACCTTAG CGGCACAGTTTAACCGTGATGGTCACGATATCGTTGATCACTACACTTACTGCTTCGTCGGCGACGGCTGTTTGATGGAA GGTATTTCCCACGAAGCCTGTTCATTAGCCGGTACTTTAGGTCTAGGCAAACTTGTCGCATTTTGGGATGACAACGGTAT TTCTATCGATGGCCATGTTGAAGGCTGGTTCACCGATGATACGCCAAAGCGTTTTGAAGCTTACGGCTGGCATGTGATTG CCGGTGTTGACGGTCACGATAGTGCGGCAATCCGTGCTGCTATCGAAGCGGCTAAAGCGGTGACCGATAAACCAACCATG ATTTGCTGCAAAACCATTATCGGTTTTGGTTCACCAAACAAATCTGGCAGCCACGATTGCCACGGCGCGCCATTAGGCGA TGCGGAAATCGCAGCAGCCCGTGAATTCCTTGGCTGGCCATACGCACCGTTTGAAATCCCTGCTGACGTTTATGCCGGTT GGGATGCCAAAGAAGCCGGTGCTGCCCGTGAAGCAGCATGGAACGAGAAGTTTGCGGCTTATAGCGCAGCTCACCCAGAA CTGGCTGCTGAATATGAGCGCCGTGTACTAAAAGGTGAATTACCTGCTGATTTCGAAGAAAAAGCGCAGGCATTCGTGCA AGCATCACAGGACAAAGCCGAAGGTATTGCGAGCCGTAAAGCCTCACAAAATGCCATCGGTGCTTTCGGTGCCATGTTAC CTGAACTGTTAGGCGGCTCTGCTGACTTAGCGGGTTCTAACTTGACACTGTGGTCAGGTTCTAAAGGTATTCAAGACGAT CCAGCTGGTAACTACATTTACTACGGCGTGCGTGAATTCGGCATGAGCGGCATTATGAACGGTGCTTCGCTGCATGGTGG TTTCATCAACTACGGCGCAACTTTCATGATGTTCATGGAATACGCACGTAACGCAGTCCGCATGTCGGCGCTGATGGGCA TTCAAAACATCTTCGTTTATACCCATGACTCTATCGGTCAAGGTGAAGATGGTCCAACGCATCAGCCAGTTGAGCAACTA GCTAACCTGCGTATGACGCCAAATATGGCCGTATGGCGCCCATGTGATGCGGCAGAAACGGCGGTTTCTTGGAAAGCTGC GATTCAACGTCGCAATGCGCCAACGTCACTGATTTTCAGCCGTCAAAACCTCAAAGCCCAAGCGCGTACCGCTGAGCAAT TAGCCAACGTGGCTAAAGGTGCTTATGTACTGCAAGACTGTGCGGGTACACCAGAACTGATCCTGATCGCAACCGGTAGC GAAGTACAATTGGCGATGGATTCTGCGGCTGCATTAACTGAGCAAGGTAAACAAGTTCGCGTAGTCTCTATGCCATCGAC AACTGAGTTCGATAAGCAAGATGCCGCTTATAAAGAATCGGTATTACCACGCGCTGTGACTAAACGTGTGGCTATCGAAG CGGCGCATACCGATTTCTGGTACAAGTACGTCGGTTTTGAAGGCACTGTTGTTGGCATGACCACTTTTGGTGAGTCAGCG CCGGGTAACGTGTTATTGAATCACTTCGGTTTCACCGTTGAAAATGTGCTGAATGCTGCAAAATCATTGGGCTAA Protein sequence : MSSRKVLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTNPKWVDRDRFVLSNGHGSMLIYSLLHLTGY ELPIEELKQFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNRDGHDIVDHYTYCFVGDGCLME GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDDTPKRFEAYGWHVIAGVDGHDSAAIRAAIEAAKAVTDKPTM ICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWPYAPFEIPADVYAGWDAKEAGAAREAAWNEKFAAYSAAHPE LAAEYERRVLKGELPADFEEKAQAFVQASQDKAEGIASRKASQNAIGAFGAMLPELLGGSADLAGSNLTLWSGSKGIQDD PAGNYIYYGVREFGMSGIMNGASLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMAVWRPCDAAETAVSWKAAIQRRNAPTSLIFSRQNLKAQARTAEQLANVAKGAYVLQDCAGTPELILIATGS EVQLAMDSAAALTEQGKQVRVVSMPSTTEFDKQDAAYKESVLPRAVTKRVAIEAAHTDFWYKYVGFEGTVVGMTTFGESA PGNVLLNHFGFTVENVLNAAKSLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 74 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
