Gene Information

Name : Sbal175_3430 (Sbal175_3430)
Accession : YP_006021970.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4069601 - 4070503 bp
Length : 903 bp
Strand : -
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: shw:Sputw3181_3283 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
GTGCCTAAGACATATCAGCCCGATCCGCTCATTGATGTTTTTCTTGATGATCTTTGGTCGAGCAAGGGACTGAGTGACAA
CACCTTATCGGCCTATCGCACCGATTTGCGCCATTTTGATCGTTATCAAGCTCAGCAAGGGGTAACGCTGCTCGCGGTTT
CTCAGGCGGATGTCAGGGCGTATTTAGCCTTTAGAGTTGAGCAGGATTTTGCGCGCACCAGTAGCGCTCGGCTGCTCAGC
AGTTTACGGCGTTTCTATACCTATTTAGTGCAGACCAAGCAGATTTCAGCCGATCCTATGGCCCTAGTTGAGTCGCCTAA
ATTAACCCGCCATTTACCCGATTCATTGAGTGAATCGCAGGTCGATCGCTTGTTGTCTGAGCCCAATGTGGAAGATGCCG
TCGAATGTCGCGACAAAGCCATGCTAGAGCTTTTGTATGCGACAGGCTTGAGGGTGAGTGAGCTCGTTGGCTTGACGATG
GAGCAGATGAGCCTGCGCCAAGGCTTAGTGCGCATTGTGGGTAAGGGCGGCAAAGAGCGTCTTGTGCCACTGGGAGAATT
AGCGATTACCGAGGTCGAGAGCTACATGAAGTTTGCGCGCCAAGAGTTGCTCGGCAATAAACAGTCCGATGTGGTGTTTC
CATCAAAACGCGGGCAGATGATGACGCGGCAAACCTTTTGGCATCGGATTAAGCTGTATGCCCTACGTGCTGGGATTGAA
ACCGCATTATCACCGCACACATTACGCCATGCTTTTGCTACCCATTTGCTCAATCACGGTGCTGATCTGCGGGTGGTGCA
ATTGCTGTTAGGCCATAGCGACCTGTCGACCACGCAGATTTATACCCATGTGGCGCGGGCAAGGTTGCAGGAATTGCATC
AACAGCATCATCCAAGAGGCTGA

Protein sequence :
MPKTYQPDPLIDVFLDDLWSSKGLSDNTLSAYRTDLRHFDRYQAQQGVTLLAVSQADVRAYLAFRVEQDFARTSSARLLS
SLRRFYTYLVQTKQISADPMALVESPKLTRHLPDSLSESQVDRLLSEPNVEDAVECRDKAMLELLYATGLRVSELVGLTM
EQMSLRQGLVRIVGKGGKERLVPLGELAITEVESYMKFARQELLGNKQSDVVFPSKRGQMMTRQTFWHRIKLYALRAGIE
TALSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-56 58
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-56 58