Gene Information

Name : Sbal175_3178 (Sbal175_3178)
Accession : YP_006021720.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3768085 - 3769581 bp
Length : 1497 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase; KEGG: shw:Sputw3181_3079 aldehyde dehydrogenase

DNA sequence :
ATGAGCACACCGAAGAAACGCAGCGAATGGGAAAGTCTTGCTGCCAGCCTGTCTATTAATGGGAAGGCGTTTATCAATGG
CGAATACCAAGATGCCGTTTCGGGTAACACCTTTGATTGTATTAGCCCTATCGATGGCCGCTTGCTGGTAAAAGTGGCGA
GTTGCGATCTTGCGGATGCCAATCTTGCGGTTGCCAATGGCCGCAGCGTATTTGAGTCCGGTGTTTGGTCGCAGCAGTCT
CCAGTAAAGCGCAAACAAGTGATGATACGTTTCGCCGAATTACTCGAAGAAAATGCCAATGAACTCGCATTGTTAGAAAC
CCTCGACATGGGTAAACCCATTCGTTTCTCTAAAGCGGTGGATGTGGCGGGCGCCGCCCGTGCGATTCGCTGGTCTGGCG
AAGCGATTGATAAAATTTACGATGAACTCGCACCAACCGCTCACAATGAAATAGGCATGATCACCCGTGAACCAGTCGGT
GTTGTCGCTGCAATTGTGCCGTGGAACTTCCCTATGCTGATGGCGTGTTGGAAGCTCGGGCCTGCACTTGCTACAGGTAA
CAGTGTGGTATTAAAACCCTCTGAAAAATCTCCCTTAACGGCAATCCGCATGGCACAACTCGCCATTGAAGCCGGGATCC
CACAAGGCGTACTAAATGTGTTGCCAGGATTTGGCCATACCGTAGGTAAAGCCTTAGCCCTGCATATGGATGTGGATACG
CTGGTGTTCACAGGTTCGACAAAAATTGCCAAGCAATTAATGATTTACGCTGGCGAGTCGAACATGAAACGCGTGTGGTT
AGAGGCGGGAGGTAAGAGCCCCAATATCGTCTTTAATGACGCACCAGATCTGAAAGCCGCTGCTGTTGCTGCGGCCGAAG
CGATTGCCTTTAACCAAGGTGAAGTTTGCACCGCAGGTTCGCGTTTGCTGGTGGAATCCGAGGTGAAAGATGAGCTTATC
GCGCTTATTGCAGAGGAGCTAGCCTCATGGCATCCGGGCCATCCACTCGATCCTGCGACTGTGAGCGGCGCCGTTGTCGA
TAAACAACAGTTAGACACAGTACTCAGTTACATCAAAGCGGGTAAAGATGAAGGTGCGACCTTAGTCCACGGTGGCAGCC
AAGTCATGGCCGATACGGGCGGTGTATATGTGCAGCCAACGGTATTCTCTAACGTAAACAACCAGATGAAGATTGCCAGC
GAAGAGATCTTTGGCCCAGTTTTATCTGTCATTGAATTTAATGGCATGGAAGAAGCGATATCAATCGCCAACGATACCAT
CTACGGTTTAGCCGCTGGCGTGTGGACATCGAATATTAGCAAGGCCCATAAAACCGCCAAAGCCCTGCGCGCTGGCATGG
TATGGATCAACCATTACGATGGTGGCGATATGACAGCGCCGTTCGGCGGCTATAAACAGTCAGGTAATGGCCGAGATAAA
TCTCTGCATTCCTTCGACAAATACACAGAATTGAAAGCGACTTGGATCGTGCTATAA

Protein sequence :
MSTPKKRSEWESLAASLSINGKAFINGEYQDAVSGNTFDCISPIDGRLLVKVASCDLADANLAVANGRSVFESGVWSQQS
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDVAGAARAIRWSGEAIDKIYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPMLMACWKLGPALATGNSVVLKPSEKSPLTAIRMAQLAIEAGIPQGVLNVLPGFGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESEVKDELI
ALIAEELASWHPGHPLDPATVSGAVVDKQQLDTVLSYIKAGKDEGATLVHGGSQVMADTGGVYVQPTVFSNVNNQMKIAS
EEIFGPVLSVIEFNGMEEAISIANDTIYGLAAGVWTSNISKAHKTAKALRAGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SLHSFDKYTELKATWIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-122 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-72 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-72 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-72 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_3178 YP_006021720.1 aldehyde dehydrogenase VFG0082 Protein 4e-72 42