Gene Information

Name : Sbal175_3013 (Sbal175_3013)
Accession : YP_006021558.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.8
Position : 3573721 - 3575184 bp
Length : 1464 bp
Strand : -
Note : TIGRFAM: Betaine aldehyde dehydrogenase; KEGG: sdn:Sden_0714 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase

DNA sequence :
ATGTCAGTAGAAGTACAGTACAACTTTATTGCGGGTCAGTTGCTCGCTAACGATAGCGGCGAAACCTTCGACGTCGTCAA
TCCTGCCACTGGGCAATTGGCGTATCGAGTGCAAGTGGCCGATGAGAAAATTCAGCAAGCGGCCATCGAGAGCGCCAAAA
AAGGCTTTGCGATTTGGTCTGCCATGAGTGCTACTGAACGCAGCCGTATTCTGTTAAACGCGGTCGCATTATTGCGCGCT
CGTAATGATGAACTCGCGGCAATCGAAGTGCGCGACACAGGTAAACCTTGGCAAGAAGCCTCAGTGGTTGATGTGGTCAC
AGGCGCAGATGCTATCGAGTTTTTCGCCCATATTGCCCCAGGGCTTGAAGGCGCGCAGCAGCAAGTCGGTGGGGATTTTT
ATTACACCCGCCGTGAGCCTTTAGGCATTTGTGCTGGTATTGGCGCCTGGAATTACCCATTACAAATCGCCTGTTGGAAG
GCCGCTCCTGCATTAGCCAGCGGCAATGTGATGATTTTTAAACCTTCGGAAGAAACGCCGCTTGGCGCACTGAAATTAGC
GCAACTCTTAAGTGAAGCGGGTTTGCCAGATGGCGTATTTAACGTCGTGATGGGCGATGGCAAGGTTGGCGCTTGGTTAA
CCGGACATCCGGATATTGCCAAAGTGTCTTTCACTGGTGAAGTCGGTACTGGCAAAAAAGTCATGGCCGCTGCAGCAAGT
TCATTAAAAGACGTCACTATGGAACTCGGTGGAAAATCACCGCTTATCGTGTTTGACGATGCCGATATCGACAATGCCGT
TTCAGGTGCCATGCTCGGTAACTTCTACACCCAAGGTGAAGTCTGCACCAATGGGACACGAGTGTTTGTCCATGAGTCAG
TTTATCCATGCTTTATTGAGAAGCTGCTTGCCCGTACTCAAGCCAATATTGTGGTGGGCGATCCTATGGCGCCAGAGACT
AACTTTGGCGCGTTGATCTCCAAAGATCATCAGCAAAAAGTGCTCGATTATATTCAGCAAGGTATCGACGACGGCGCAAC
TTTGCTCACCGGTGGCACAGCATTAACGCCTGATAATGCTCTCAATGGTTACTTTGTCGCCCCAACCATTTTCACCGATT
GCACCGACGAGATGCGTATCTGTAAAGAGGAAATCTTTGGCCCTGTGATGTCGGTACTCACCTTTAAAGATGAAGCCGAA
GTGATTGCTCGGGCAAACAATACCGCCATGGGCCTAGCTGCTGGGGTGTTCACCCAAGATATCAGCCGTGCCCATCGGGT
TATTCATCAGTTACAAGCGGGTATTTGCTGGATCAATGCCTATGGTGCATCGCCAGCAGAAATGCCAGTAGGTGGGTATA
AGTTGTCGGGTATTGGCCGTGAAAACGGTAGCGAGACACTCAAGCATTACACCCAAGTTAAAGCCGTTTACGTGGGTCTA
CAGCCCTTAGAAAGCCCATTTTAA

Protein sequence :
MSVEVQYNFIAGQLLANDSGETFDVVNPATGQLAYRVQVADEKIQQAAIESAKKGFAIWSAMSATERSRILLNAVALLRA
RNDELAAIEVRDTGKPWQEASVVDVVTGADAIEFFAHIAPGLEGAQQQVGGDFYYTRREPLGICAGIGAWNYPLQIACWK
AAPALASGNVMIFKPSEETPLGALKLAQLLSEAGLPDGVFNVVMGDGKVGAWLTGHPDIAKVSFTGEVGTGKKVMAAAAS
SLKDVTMELGGKSPLIVFDDADIDNAVSGAMLGNFYTQGEVCTNGTRVFVHESVYPCFIEKLLARTQANIVVGDPMAPET
NFGALISKDHQQKVLDYIQQGIDDGATLLTGGTALTPDNALNGYFVAPTIFTDCTDEMRICKEEIFGPVMSVLTFKDEAE
VIARANNTAMGLAAGVFTQDISRAHRVIHQLQAGICWINAYGASPAEMPVGGYKLSGIGRENGSETLKHYTQVKAVYVGL
QPLESPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-69 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_3013 YP_006021558.1 betaine aldehyde dehydrogenase VFG0082 Protein 1e-69 41