Gene Information

Name : Sbal175_2960 (Sbal175_2960)
Accession : YP_006021505.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Unknown
Product : Recombination-associated protein rdgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3502485 - 3503399 bp
Length : 915 bp
Strand : +
Note : KEGG: shw:Sputw3181_2809 recombination associated protein; HAMAP: Recombination-associated protein rdgC; PFAM: Putative exonuclease, RdgC

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTGCCGTCGAAACCGAAGCGCTAGAAACTGCGTTGGC
CGATTTCACTTTCTCTCCGTGCTCAAGCCAAGATGTCAGTAAATTCGGTTTTTCCAATGCGCTAGGCAAGAAAGGCAGCT
CCTTGGTACACAGTGCCGATAATCGCCATCTGATCTGTGTAACTAAAGAAGAGAAAATTCTGCCAGGCCAAGTCATCAAA
GAAGCCTTAGAAGAAAAAGTCGCCCTCATTGAAGATGAAGAAAATCGTAAGATGGCGAAAAAAGAAAAAGATGCGCTAAA
AGATGAAATCATTACTAGCCTACTGCCACGCGCTTTTTCACGCCGCAGCCAAACCCATGCTTTGATTTTGCCAGAGCTGG
AAATGATCCTTGTCGACAGTTCAAGTGCCACTAAAGCCGAAGAGCTATTAGCATTATTACGTAAAGCGCTCGGTAGTTTG
CCGGTGATCCCATTGAGCTTTAAAGCGCCAGTCGAATCCAATTTAACCGAATGGTTAAAACTTGGCAGCGCGCCATTACC
TTTTGAAATGCAAGATGAAGCTGAACTTAAATCCGAAGCAGATGAAGGCGGCATTGTACGTTTCAAGCAACAGGATTTAA
AAGAAGACGAAGTCTTAGCTCACCTCGCAACAGGTAAGCAAGTACACAAGTTAGCACTGCATTTCGGCCAATCGATTGCA
CTATTATTGCAATCGGATGCCAGCGTTAAACGCCTTAAATTCTCAGAAGAATTTAGAGCAGGTAACGATGAAGTCGGCAC
TGATGACCCTATGGCACGTTTAGATGCAGACTTCGCCTTAATGGGCAGCGAGTTAGTCGCCTTGATGCATGCACTCGTGG
CAGCACTAGGTGGACTCGAAGAAGCACAAGTTTAA

Protein sequence :
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGSSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKAEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEEAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 2e-48 44