Gene Information

Name : Sbal175_2716 (Sbal175_2716)
Accession : YP_006021266.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.11
Position : 3200702 - 3201895 bp
Length : 1194 bp
Strand : -
Note : TIGRFAM: Methionine gamma-lyase; KEGG: shw:Sputw3181_2594 methionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

DNA sequence :
ATGCAAGATGAGTCAGGCAAAATGTGGAAAGCGGCAACACAGGTTATTCATGGCGGCCATGAGCGTGAGGCCTTTGGCGC
CTTAGTGACGCCGCTATATCAAAGTGCGACTTTTGTGTTTGAGTCCGCACAGCAAGGTGGTGAGCGATTTGCGGGTAATG
AGCCGGGGTATATTTACACGCGCTTAGGGAATCCGACAACCGCCGAGCTTGAACGTAAAATGGCGATTTTAGAAGGGGCA
GAAGCCGCCGCTGCAACCGCATCTGGTATGGGCGCAGTATCCGCCGCATTACTGGCTAACTTGCAGATGGGTGATCACTT
AGTGGCATCCAATGCCGTATACGGTTGTACTTATGCGCTAATGACGACTCAGTTCGCTCGCTTTGGGATTGAAGTGTCCC
TAGTGGACTTTTCATCGGTAGTAGAAATAGAAGCGGCGATTAAATCCAATACTAAGGTCATTTTCTGTGAAACTCCAGTG
AATCCCCATTTGCAGGTGTTTGATTTGGCGGCAATTGCGAATATTGCCAAACGTCATCAGTTGGTCAGTATTGTCGATAA
TACTTTTATGACCCCATTACTGCAGAGGCCGCTGGATTTTGGTATTGATTTGGTGATCCACAGTGCGACTAAATATCTTA
ATGGTCATGGCGATGTGATTGCGGGGATAGTGTGTGGCAGCGAAGAACAGCTCCATAAAGTGAAGTATGAAATCTTAAAA
GATATTGGCGCTGTGATATCGCCACACGATGCTTGGCTGATCTTGCGCGGCCTTAAAACCTTAGATGTACGTTTACAGCG
CCATTGCGATAGTGCCCAGCGCGTGGCCGAATTTTTGGCTGAACATCCCAGTATTAACCGCGTGTATTATCCCGGACTTG
CCTCTCACCAAGGGCATAAATTCATTGATCAGCAGATGAAACGTGCCGGCGGGGTGATCGCGTTTGAACTGGCGGCAAAT
TTAGAGGAGGCTATGGCCTTTGTGGGGCATTTAAGCTTGTTCTCTATTGCGGTGAGCCTAGGCGATGCAGAATCCCTCAT
CCAACATCCAGCGTCGATGACGCACTCTCCCTATACGCCAGAGGCGAGAGCGGCGGCTGGCATTGGTGATAATCTGCTGC
GAATTTCCATTGGCTTAGAAGATTGTGACGACATTATCGCTGACTTGAGTCAAGCGTTAGCGCGTTTAGCTTAA

Protein sequence :
MQDESGKMWKAATQVIHGGHEREAFGALVTPLYQSATFVFESAQQGGERFAGNEPGYIYTRLGNPTTAELERKMAILEGA
EAAAATASGMGAVSAALLANLQMGDHLVASNAVYGCTYALMTTQFARFGIEVSLVDFSSVVEIEAAIKSNTKVIFCETPV
NPHLQVFDLAAIANIAKRHQLVSIVDNTFMTPLLQRPLDFGIDLVIHSATKYLNGHGDVIAGIVCGSEEQLHKVKYEILK
DIGAVISPHDAWLILRGLKTLDVRLQRHCDSAQRVAEFLAEHPSINRVYYPGLASHQGHKFIDQQMKRAGGVIAFELAAN
LEEAMAFVGHLSLFSIAVSLGDAESLIQHPASMTHSPYTPEARAAAGIGDNLLRISIGLEDCDDIIADLSQALARLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-64 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-63 42
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-58 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_2716 YP_006021266.1 methionine gamma-lyase BAC0207 Protein 5e-82 51