Gene Information

Name : Sbal175_2423 (Sbal175_2423)
Accession : YP_006020980.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2867812 - 2868456 bp
Length : 645 bp
Strand : -
Note : KEGG: svo:SVI_2263 LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR

DNA sequence : 
ATGGAATTTAGTCATGGTAAAGTGATCAATATTTTAGTGGTCGATGATCATTCGTTGATTTTCGACGGATTACTGGGTTG
TTTAGCGCCTTATCCAGAGCTTAATCTAATTGGATCGGTTGAAGATGGGCTCGCGGTATACGAGAAATGCCTCAAACTCA
GACCAGATCTGGTTTTTATGGATCTGAAATTACCGGGAATGGGTGGATTTGACGTGATTCGTCAGCTCAGACAACGTTGG
CCAGAGATGATGATTATCATGTTAACGGCGACGGTTGAGGAAAAAAGGGCGCGGGAAGCGCTCGATGTCGGCGCCAATGG
TTATGTGTTAAAAAATAGCCCTAAGAGCACACTGTTAGCGGCAATCAAATGTGTATGTAAGGGTAAAAACTTTATCGATC
CTAGCTTAGATGAGAGACAAATTGCCGCTTTGAGTGGGGTAGTCGATGGGGATATGCCTTTGCTGACCCCCCGCGAGCAA
CAAGTGCTAAAACTCATCTGTGAGGGGCGCCGCAACCGTGATATTGCCGAAGATTTAGTGATTGGTTTAAAAACGGTTGA
GACTCACAGGATGAATTTAATGCGCAAACTTAATGCGCATAACGTCGCCGAGTTAATGCATTGGGTACAAAGGCTTGGAT
TATGA

Protein sequence : 
MEFSHGKVINILVVDDHSLIFDGLLGCLAPYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGMGGFDVIRQLRQRW
PEMMIIMLTATVEEKRAREALDVGANGYVLKNSPKSTLLAAIKCVCKGKNFIDPSLDERQIAALSGVVDGDMPLLTPREQ
QVLKLICEGRRNRDIAEDLVIGLKTVETHRMNLMRKLNAHNVAELMHWVQRLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 3e-47 53
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 6e-36 48
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 5e-40 48
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 2e-40 48
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 2e-40 48
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 2e-40 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_2423 YP_006020980.1 LuxR family two component transcriptional regulator VFG0492 Protein 7e-41 48