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Name : Sbal175_2396 (Sbal175_2396) Accession : YP_006020953.1 Strain : Shewanella baltica BA175 Genome accession: NC_017571 Putative virulence/resistance : Virulence Product : type III secretion protein, HrcV family Function : - COG functional category : - COG ID : - EC number : - Position : 2840794 - 2842851 bp Length : 2058 bp Strand : - Note : KEGG: svo:SVI_2235 type III secretion system apparatus protein, HrcV family; TIGRFAM: Type III secretion protein HrcV; PFAM: Type III secretion system FHIPEP DNA sequence : ATGAACCTCATCAGTCGTTGGTTAAGTAAAGCCGCAGGGCGTCACGATATCATCTTAAGTGCCATGTTAATGGTAGCCGT ATTTATGATGATCTTGCCTCTACCGACACCTTTGGTCGATGTTTTAATTGCCTTAAACCTTGGCTTGTCCATAGTGTTAT TAATGATCGCCATTTACATCCGTGACCCTTTAGAGTTCTCAGTCTTTCCATCCCTACTACTGATCACAACCTTGTACCGT CTGGCTCTCACTATCAGTACCAGCCGTTTGATTTTACTGCAGCATGATGCAGGGGATATCGTATATACCTTCGGTAACTT CGTCGTCGGCGGCAACTTAGCGGTCGGAATTATTATCTTTGCCATCATCACCATAGTGCAGTTTATCGTGATTACTAAGG GTTCAGAGCGGGTGGCGGAGGTGAGTGCACGTTTTTCCCTCGATGGAATGCCAGGTAAGCAAATGAGTATCGATGGCGAT ATGCGTGCTGGCATCATTGACGCTAAAGAGGCAAAACGCCAACGTGCGCAAGTTCAGAAAGAAAGTCAGCTCTATGGCGC GATGGACGGCGCGATGAAGTTTGTCAAAGGCGATGCCATCGCCAGTATTATTGTCATTTTAACCAATATCATAGGAGGTA TCGCTGTCGGTGTCATGCAGCACAATATGTCGGCTGCCGAAGCATTAAATACCTATGCAGTCTTGTCTGTCGGGGATGGT TTGATAGCCCAAATACCTTCACTACTGATTTCAGTCACCGCAGGCTTAATCGTGACCCGAGTGCCAGGAGAGCAGAGACA GAACTTAGCCAACGAATTAGTGATGCAAGTAGGACGTCAACCTGCATCATTGCAAATGGCGGGGATCGTGATGTTCATCT TTGCCTTAATCCCAGGTTTCCCAATTTTAGTCTTCGGCACACTCGGTTCGGTCGTCTTAGGGGCTTCATTGTGGTTGACG CGTCAGCAAAAACGAGCGAGTGCTCAAGGGGATGAGAGCCATTTCACCGAAGCAGGTAAAAGTGAGATGGCCAATGTCGA CAATATGGCGCCGGGAGCTGTACCGCTGATTTTATATCTTGGTGCCGATGTGCCTATCCATGGGGTTAAAGAAGCACTGC AAAAACTGCGTTGGCAATGGTTTGAGCAATTGGGCGTGCCATTACCGGAAATACAATTACAGATAGCTAAGAAAGGCACC CTAGGCCGCTGTGATGTACTTTTGTACCAAGAGCCCGTATTGCAACTGCAATTAGCACCACAGGAAGTCCTGTTGATTGA CCCCATCGCAACGATTCCATGCCGTGTCGAGTCCATCCCTTTTAGTAATCAAAGATTGCATTGGATCAAAGGTAATGCGC TTGAGCAGGCGGAGGCCCAAGGTTTAGCGCTTTGCCGTGATGAGCAAATTCCTGCTTATGTGATGGGTAAAGTGATCGAC CGCTATGCGGGGGAGTTTATCGGCGTACAAGAAACCCGTTATTTAATGGATGCCATGGAGGCTCGCTACGGTGAGCTAGT CAAAGAACTTCAACGACTGTTGTCTGTGGGGAAGGTCGCCGAGATCCTACAACGCTTAGTCGAAGAGGGGATTTCAGTGC GCGATCTACGGACTATTTTTGAAACCTTAGTCGAATGGGTACCAAAGGAGAAAGACATCATCATGTTAACTGAGTATGTG CGGATTGCGCTTCGCCGCCATATTCGCCGCAAGTTTGCGACCCCACAAGGTTGGATTGCTGTGCTTATGGTCGGAGAAGG AATTGAAAATGTGATCCGTGAATCGATACGACAATCGACAGCCGGTTCTTATTCAGCCCTAGATATGGCGCAAACTCAGC AAATATTAACCTGCATTCAAGAACAGCTGCCACCGGAGCAAACCTGTGTACTGCTGACTTCGCTCGATGTGCGCCGTTAC CTGCGAAAAATCGTAGAACGCGAGTTATTTAGCACACCCGTTTTGTCGTTTCAGGAATTAGGCGACGATGCAGAAATAAA AGTCATAGGCCAAGTGGACTTAGTGGGTGACATGCTCGATGCCGCACTGGCGAGCTAA Protein sequence : MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLVDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSVVLGASLWLT RQQKRASAQGDESHFTEAGKSEMANVDNMAPGAVPLILYLGADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGT LGRCDVLLYQEPVLQLQLAPQEVLLIDPIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLALCRDEQIPAYVMGKVID RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGDMLDAALAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 1e-175 | 62 |
| ssaV | NP_805085.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 7e-145 | 54 |
| ssaV | YP_216422.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 3e-145 | 54 |
| ssaV | CAA70536.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-145 | 54 |
| ssaV | NP_460379.1 | secretion system apparatus protein SsaV | Virulence | SPI-2 | Protein | 2e-145 | 54 |
| ssaV | NP_456114.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 7e-145 | 54 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 2e-139 | 51 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 2e-139 | 51 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 3e-138 | 51 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 8e-139 | 51 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 6e-139 | 51 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 8e-139 | 51 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 6e-139 | 51 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 5e-139 | 51 |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 3e-139 | 51 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 2e-139 | 51 |
| unnamed | AAL06368.1 | EscV | Virulence | LEE | Protein | 1e-136 | 50 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 5e-139 | 50 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 4e-139 | 50 |
| escV | AFO66414.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-135 | 50 |
| escV | AFO66296.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-135 | 50 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 1e-125 | 47 |
| invA | NP_806499.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 4e-95 | 42 |
| invA | NP_461817.1 | needle complex export protein | Virulence | SPI-1 | Protein | 4e-95 | 42 |
| invA | YP_217815.1 | invasion protein | Virulence | SPI-1 | Protein | 4e-95 | 42 |
| invA | NP_457290.1 | possible secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 4e-95 | 42 |
| invA | AAS66860.1 | InvA | Not tested | SSR-2 | Protein | 7e-89 | 42 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 8e-93 | 41 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 8e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0514 | Protein | 7e-146 | 54 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0813 | Protein | 3e-139 | 51 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0729 | Protein | 1e-139 | 51 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0064 | Protein | 2e-128 | 46 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0198 | Protein | 3e-111 | 46 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0384 | Protein | 3e-126 | 45 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG0557 | Protein | 2e-95 | 42 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG1780 | Protein | 5e-96 | 41 |
| Sbal175_2396 | YP_006020953.1 | type III secretion protein, HrcV family | VFG2126 | Protein | 8e-99 | 41 |
