Gene Information

Name : Sbal175_2390 (Sbal175_2390)
Accession : YP_006020947.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : type III secretion protein, HrpO family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2836634 - 2836903 bp
Length : 270 bp
Strand : -
Note : KEGG: svo:SVI_2229 type III secretion system EscS protein; TIGRFAM: Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3

DNA sequence : 
ATGAGCGAAACTATCATAGTACATTTCACCTCAGAACTACTGTGGATGGTGTTACTGCTGTCGCTACCTGTCGTTATAGT
GGCATCAGTTGTCGGAGTTTTGGTTAGTCTTATTCAAGCCCTGACCCAAATCCAAGACCAAACACTGCAGTTTCTAATCA
AACTCATCGCCGTGTGCGTGACACTCGTGGTCTGTTATCACTGGATGGGCAGCTCACTGTTGAATTACGCCAGCATGGCT
TTCGATCAAATTAGCCAAATGGGGGATTAG

Protein sequence : 
MSETIIVHFTSELLWMVLLLSLPVVIVASVVGVLVSLIQALTQIQDQTLQFLIKLIAVCVTLVVCYHWMGSSLLNYASMA
FDQISQMGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 5e-08 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_2390 YP_006020947.1 type III secretion protein, HrpO family VFG0395 Protein 9e-08 60
Sbal175_2390 YP_006020947.1 type III secretion protein, HrpO family VFG0187 Protein 0.27 52