|
Name : Sbal175_2347 (Sbal175_2347) Accession : YP_006020906.1 Strain : Shewanella baltica BA175 Genome accession: NC_017571 Putative virulence/resistance : Unknown Product : glycine betaine/L-proline ABC transporter ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.32 Position : 2784440 - 2785666 bp Length : 1227 bp Strand : + Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: sfr:Sfri_1817 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core DNA sequence : ATGGAAAAAATAGTGATAAAAAACCTGTATAAGGTTTTTGGTGCTGAGCCTCGCAAGGGGGTGAAGTTACTTGAACAAGG GAAAAGCAAAGAGGAAATTTACGAACAGACAGGGCTGACAGTTGCCGTACAAGGTGCCAGCTTTAGCGTAAATAAAGGTG AGATTTTTGTGGTAATGGGGCTATCCGGCTCAGGAAAATCAACCCTAGTAAGAATGTTAAACAGGCTCATTGAACCCACG TCGGGAGAGGTATTAGTCGATGGCCAAAATATCCTCAACATGAATAAGGATGAATTGGTCAGGTTTCGCAGAAGTAAAAC CAGTATGGTGTTTCAATCCTTCGCGCTTATGCCCCATCAAACAGTGTTAGAGAATGCCGCATTTGGCCTCGAACTCGATG GCATGGATAAAAAACAGCGTGAAGAACGAGCCCTAGATGCTTTAAAACAAGTCGGACTCGAAGGTTTGGAGAAGGCCTAT CCCAATGAGTTAAGTGGGGGTATGCAGCAGCGAGTGGGATTAGCGCGAGGCTTAGCGGTTGATCCTGATATCTTGCTCAT GGATGAGGCATTTTCGGCGCTTGATCCGCTTATCAAGACAGAGATGCAAGATGAACTGCTGAAACTGCAAGATCGTCATG AACGCACCATCATTTTTATCTCCCATGATTTAGACGAAGCATTACGGATTGGCGACCGAATTGCCATTATGCAGGGCGGC CGAGTGATTCAGGTGGGGACGCCGGAAGAAATCCTGCAAAATCCCGCGGATGATTATGTACGTGCATTTTTCCGTGGTGT GGATCCAACCGGTGTTATCTCCGCTGGGGACATTGCCCGCGACAGTCAGCCAACGGTCGTTTGGCATACTAAAGCCGGTA GCCCACGCGCCACCCTAGAAATGTTAAGTATTAAAGATCGCGAATTTGCCTATGTACTTGACTCAGAACACCGCTTTTTA GGTGTGGTCTCTTCAGACTCCCTGCGCGACGCTGTTGACCAAGGAAATGGTGGTAGCAAACTTGAGCATGCTTTTCTGAC AGACGCTAAATCAGTTCAAGAAACAGATAGTCTTCAGGATATCTTACCCTTGGTCGCCTCCCATGCTTGGCCTATTCCAG TTGTAAACTCAGAAAGTAGATATCGCGGCGTTGTTTCTAAAAATCTGTTTCTTCGTACCTTAAACCGTGCGGAAAAGGGG ACTTATTTCGAGCAATCAGCATCTTAG Protein sequence : MEKIVIKNLYKVFGAEPRKGVKLLEQGKSKEEIYEQTGLTVAVQGASFSVNKGEIFVVMGLSGSGKSTLVRMLNRLIEPT SGEVLVDGQNILNMNKDELVRFRRSKTSMVFQSFALMPHQTVLENAAFGLELDGMDKKQREERALDALKQVGLEGLEKAY PNELSGGMQQRVGLARGLAVDPDILLMDEAFSALDPLIKTEMQDELLKLQDRHERTIIFISHDLDEALRIGDRIAIMQGG RVIQVGTPEEILQNPADDYVRAFFRGVDPTGVISAGDIARDSQPTVVWHTKAGSPRATLEMLSIKDREFAYVLDSEHRFL GVVSSDSLRDAVDQGNGGSKLEHAFLTDAKSVQETDSLQDILPLVASHAWPIPVVNSESRYRGVVSKNLFLRTLNRAEKG TYFEQSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 3e-85 | 50 |
