|
Name : Sbal175_2057 (Sbal175_2057) Accession : YP_006020631.1 Strain : Shewanella baltica BA175 Genome accession: NC_017571 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 2433892 - 2436504 bp Length : 2613 bp Strand : + Note : TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: psm:PSM_B0219 ATPase; SMART: ATPase, AAA+ type, core DNA sequence : ATGTCAAATACCCCATTAAAGAGCCTTGTTGAAAAGCTTAGTCCATCATCAAAAATGGCACTTGAGGCTGCAACGGCTAA ATGTCAGTCTCGTAGTCACTATAGCGTTGAAATTGAGCACTGGCTGGATGCAATTTTAGAACAGAAGGATTCAGATATTA GGCTTCTGTTGAATGCATTCTCTATTGATGTTGATAGGGTGAAGTATCAATTACAACAAGCATTAGAAAACTTTAAGACA GGTAACAATTCTTTACCTGCTATTTCCGTGCAAGTTGTTAACTTGTTAAAAGCAACATGGTTGAATACAAGTATTGATTT TAATGATGAGCGTATTCGGACGGCATATTTACTCTATTCATTGTTGAAGGATGAAACTTTACTCGCCCCTATTAGTAGGC GTGTTACTGAGCTCGACAAAATTGATGCTGCTGAAATACTAAGAGTCTGGCCAAGTCTGGCTCAGCATTCACATGAACAA CAAGCTGCAAATATAAGTTCAAATAATACTTCTGATGCACCGACTACAGCAGGTAAAACACCGTCATTAGATCAGTTTAC TGTTGATTTAACAAAACAAGCTAGGGCTGGAAAAATTGATCCCATAATTGGACGTGATTTCGAGATTCGACAGATGATCG ATATTTTATCCCGTCGTCGTCAAAATAATCCCATTTTAACGGGTGAGGCGGGTGTTGGGAAAACCGCTGTTGTCGAGGGC TTAGCTCTTAAAATAGCTGCAGGCGATGTTCCTGATCGTCTAAAGAATGTTTCTCTGCGTGTCCTTGATCTTGCGCTATT ACAGGCGGGTGCAGGCATGAAAGGGGAGTTTGAAAACCGCTTGAAAAATGTGATCAAGGAAGTTCGCCAGAGTGCTCAAC CTATAATATTGTTTATCGATGAAGCGCATACAATGATAGGTAGTGGTGGTCAAGCTGGGCAGAATGACGCGGCTAATTTA TTAAAACCTGCATTAGCTCGTGGTGAATTGCGGACTATTGCCGCGACAACTTGGGCTGAATATAAAAAATATTTTGAAAA AGATGCGGCGCTAACCCGTCGTTTCCAAGTTGTAAAAGTCGAAGAGCCAAAGCCTGAACTCGCAATTGTTATGTTGCGAG GAATCTTGCCTGTTATGGAAACGCATCATGGTGTCAATATTGCGGATAAAGCACTGCAAGCAGCGGTACATTTATCCGAC CGTTATATTAATGGTCGACAGTTACCGGATAAGGCTGTTGGCTTACTTGATACCGCATGTTCGCGAGTGTCAATGAGTCA AGATGCTATTCCTGGTCAGCTTGAAGATCAGCAGCGCCGTGTACAGCAGCTTGAAGCCGAAATAGCACTATTACAACGCG AACTAAGATTAGGTGCGGACCACTTAGTTGCTATTGATTTGCTTACTAATCAAATTCTCGATGCAAATAATAAGCTTGAA CAAGTTCAGCAGCAGTGGACATATGAAAAAAGTTTAGTTTCAGAAGCAAAAGAACTCGCGACATTACTGCATACGGAGAA TGGGGAGGATAATAGTGCATCACTTCATCGACTGAATGAAATAAAGGCATTATTGTCAGCCATTCCAAATCCAATGGTTC ATTGGCAGGTTACAGAAAACTTAGTTGCAGAGGTTGTCTCTGATTGGACTGGTATTCCTTTAGGGAAAATGCAAGCTGAT GAAATAAAAACAATTCTGGCATTAAAGTCAATTCTAGAAGAGAGGGTTGTTGGTCAAGAACACGCCTTAGAGTTAATTGC CCGTACGGTACAAACATCACGCGCACAACTTGCTGACGAAAATAAACCGAATGGTATCTTTTTACTCACAGGTCCAAGTG GTGTAGGTAAAACTGAAACCGCTCTTGCTGTTGCAGAGCAAGTATATGGTAGTGAAGATAGTATCACTATTATCAATATG TCGGAGTTTAAGGAGGAACATAAAGTATCCTTATTACTCGGTTCTCCACCAGGCTATGTAGGATACGGTGAAGGTGGTGT GTTAACCGAAGCTGTGCGCCGCAAGCCTTATAGCGTAATTCTACTCGATGAAATGGAAAAGGCTCATCCCGGTGTTCAAG ATATTTTTTATCAGGTTTTTGATAAAGGAACAATAAAGGACGGAGAAGGTAGAGATATTGATTTTAAGAATACAATAATC ATTATAACTTCAAATGTCGGTACTGACACGACTATGCGTTTATTTGAGGATGAATCAACATCTCCCTCGCCAAATGGACT TGCTAAAGCACTTAAACCTGATCTTCTACAAGTCTTTAAGCCTGCATTTTTAGGTCGGATAAATGTTATTCCCTATTTGC CATTGGCAGATGAACAACTTAAACAGATTATTTGTTTGCAACTCAAGCGTGTTACTCGAAGGTTGTTGAATAATTATAAA GTCGAATTTAATTATGATGAAGATGTTGTCAATTATATTGTCTCGCAGTGTCAAGATGCTGATAGTGGTGCAAGAACCAT ACATAACGTTATTCAGAATAGAATATTGCCAGAGATGTCAGTCAAGATTTTACAATTTGTTGCAGAGAGCAAAGCTCTAT CAAATATCAGACTAATGGTTGATGGCAATGAATTCAAATATGATATTTTATAA Protein sequence : MSNTPLKSLVEKLSPSSKMALEAATAKCQSRSHYSVEIEHWLDAILEQKDSDIRLLLNAFSIDVDRVKYQLQQALENFKT GNNSLPAISVQVVNLLKATWLNTSIDFNDERIRTAYLLYSLLKDETLLAPISRRVTELDKIDAAEILRVWPSLAQHSHEQ QAANISSNNTSDAPTTAGKTPSLDQFTVDLTKQARAGKIDPIIGRDFEIRQMIDILSRRRQNNPILTGEAGVGKTAVVEG LALKIAAGDVPDRLKNVSLRVLDLALLQAGAGMKGEFENRLKNVIKEVRQSAQPIILFIDEAHTMIGSGGQAGQNDAANL LKPALARGELRTIAATTWAEYKKYFEKDAALTRRFQVVKVEEPKPELAIVMLRGILPVMETHHGVNIADKALQAAVHLSD RYINGRQLPDKAVGLLDTACSRVSMSQDAIPGQLEDQQRRVQQLEAEIALLQRELRLGADHLVAIDLLTNQILDANNKLE QVQQQWTYEKSLVSEAKELATLLHTENGEDNSASLHRLNEIKALLSAIPNPMVHWQVTENLVAEVVSDWTGIPLGKMQAD EIKTILALKSILEERVVGQEHALELIARTVQTSRAQLADENKPNGIFLLTGPSGVGKTETALAVAEQVYGSEDSITIINM SEFKEEHKVSLLLGSPPGYVGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGTIKDGEGRDIDFKNTII IITSNVGTDTTMRLFEDESTSPSPNGLAKALKPDLLQVFKPAFLGRINVIPYLPLADEQLKQIICLQLKRVTRRLLNNYK VEFNYDEDVVNYIVSQCQDADSGARTIHNVIQNRILPEMSVKILQFVAESKALSNIRLMVDGNEFKYDIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-165 | 46 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-144 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 8e-144 | 41 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal175_2057 | YP_006020631.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 50 |
| Sbal175_2057 | YP_006020631.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 2e-165 | 46 |
| Sbal175_2057 | YP_006020631.1 | type VI secretion ATPase, ClpV1 family | VFG0079 | Protein | 2e-106 | 41 |
