|
Name : Sbal175_2008 (Sbal175_2008) Accession : YP_006020584.1 Strain : Shewanella baltica BA175 Genome accession: NC_017571 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 2374503 - 2375240 bp Length : 738 bp Strand : - Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: son:SO_2478 3-deoxy-manno-octulosonate cytidylyltransferase DNA sequence : ATGAATGTGACTCTGTTAATCCCGGCTCGTTACGGTTCAAGCCGCTTCCCGGGCAAACCCTTAGCCCCGATTAACGGCAA GCCAATGATCCAACACGTGTATGAACGCGCGTCGTTAGCCAAAGGCCTCACCAATATTTATGTCGCTACCGATGATGACC GCATTAAAGCGGCAGTTGAAGGTTTTGGCGGCAAAGTGGTCATGACCAGCCCAGAAGCGGCATCTGGTACAGATCGTATC AATGATGCGATAAACCAACTGGGACTGAAAGATGACGACTTAGTGATCAACCTACAGGGCGATCAACCCCTTATTGACCC AACATCCATCGAGCAAGTCATCAGCCTCTTCGAGCGTCACCCAGGTGAGTTTGAAATGGCCACCTTAGGCTTTGAAATCG TGAATAAAGCCGAGCTTGACGATCCTATGCATGTGAAGATGGTGTTCGATAACAACAACTATGCCTTGTATTTCTCTCGT TCGCGTATTCCTTTTGGCCGTGACACCCAAGATTACCCCGTTTATAAGCACTTAGGTGTGTATGCTTATACCCGCAAATT CGTCCAAGCCTTCGCCGCCCTGCCATTAGGACGTCTAGAAGATCTGGAAAAACTCGAGCAATTACGTGCATTAGAATACG GCCATAAAATCAAAATCGCCATTAGCGCCTTTGATTCTATTGAAGTTGATACGCCAGAAGATATTCGTAAATGTGAGCAA CGTTTAGCGGTTGATTGA Protein sequence : MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRI NDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSR SRIPFGRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRKCEQ RLAVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 8e-42 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 6e-42 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 6e-42 | 42 |
