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Name : Sbal175_1543 (Sbal175_1543) Accession : YP_006020125.1 Strain : Shewanella baltica BA175 Genome accession: NC_017571 Putative virulence/resistance : Virulence Product : two component Fis family sigma54-specific transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 1823122 - 1824501 bp Length : 1380 bp Strand : - Note : KEGG: shw:Sputw3181_1504 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduct DNA sequence : ATGAGTGTGCCCAATTCCATCCAAGATTATTCTGTTCTCATCATCGACGATGAGCCACACATAGGCACAGTTCTCGTTCA GCTATTTGAACTTGAGGGCATTAAGGCACTCGCCACCACAGAGCCTAAAGGGATCGCTAAGCACCTGCATAAAGATTGGG CGGGAATGGTGATATCGGATGTCAACATGCCGCAATTAGATGGCATCAGCTTAATGCAACAAATCCGCCTGCAGGACCCC GACCTCCCCGTTGTGTTATTGACAGGGTTTGGGGATATCGCCATGGCAGTCAATGCCCTAAAGCAAGGCGCCTACGACTT TCTCGAAAAGCCCTTTAATAACGAGCATATACTCGATGTGGTCAAGCGCGCCTTAGATAAACGCAGCCTGACCCTAGAGA ACCGTAAGCTTAAAAAGGATCTCGAAAGTCAGAGCGTACCAGGCCCTCGCATTTTGGGTAACAGTGTCGGCATCAACCGC ATGCGCCACATCATAGATCAAGTGATAGACACCCCAGCTGATGTGTTAATCGAAGGCGAAACAGGCACAGGTAAAGAGCT CGTCGCCCGCTATTTACACGATCACAGCAGCCGCAGCCAAGCCAACTTTGTCGCCATCAACTGTGGTGCGATCCCTGAAA ACTTAATTGAAAGTGAGCTCTTTGGCGCCGAAGCAGGTGCCTTTACCGGCGTCGATAAGATGCGCATTGGTAAGTTTGAA TACGCCAACGGCGGTACATTATTTTTAGATGAAATTGAAAGTACACCACTGTCGCTGCAAGTAAAACTGCTGCGGGTACT TGAAGATCGTAAAGTTGAACGCTTAGGGTCAAACAAAAGCATCAGCCTTGATATACGGGTAATTGCCGCCACTAAGGTGG ATTTAAAAAGCCTGTGTGACACGGGGGAGTTTCGCCAAGACTTGTTGTACCGCTTAAATCTGGTGACTGTGCCTATCCCT CCCCTGCGGGATCGCCGTGAAGATATTCCTTTACTGTTCCTGCACTTTGCCCGCGTCGCATCGGCACGCTATCACAAAGC GCTTATTGCCTTAAATGCCGAGCAAAACGCCATACTCACCTCCCACGACTGGCCGGGCAATGTGCGTGAGTTACGTAATC TTGCCGAACGCTTTGTGCTACTAGGTGGAGAAGCTGCCTTTGCTGGCACTTTGGGCAACACCCCAAGCCTGCACTCGAGT ATGTCCTTACTGCAACGAGTCGAGTTTTTTGAAAGGGTATTGATTGAAGAAGCGCTTAGCCACAACAAGGGCAGCATTAA GCAAACAATGGAGCAGCTGGAACTGCCCCGTAAAACCCTCTACGACAAAATGCGAAAATACGATTTAGACCGCAAGCAGT ACATTAACTCCGATGACTAG Protein sequence : MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKHLHKDWAGMVISDVNMPQLDGISLMQQIRLQDP DLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDVVKRALDKRSLTLENRKLKKDLESQSVPGPRILGNSVGINR MRHIIDQVIDTPADVLIEGETGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCDTGEFRQDLLYRLNLVTVPIP PLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILTSHDWPGNVRELRNLAERFVLLGGEAAFAGTLGNTPSLHSS MSLLQRVEFFERVLIEEALSHNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-52 | 41 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-50 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal175_1543 | YP_006020125.1 | two component Fis family sigma54-specific transcriptional regulator | VFG1249 | Protein | 7e-63 | 42 |
