Gene Information

Name : Sbal175_1440 (Sbal175_1440)
Accession : YP_006020023.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1703378 - 1704124 bp
Length : 747 bp
Strand : +
Note : KEGG: shw:Sputw3181_1437 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein

DNA sequence :
ATGACAACACGTATCCTCGCGTTAGTTGGCTTAGTTATTCTGTTATGTATGCCGTCGGCCTGGGCTGCCGATGGTGTTTT
GCCTGCGGTTACAGTAACAACAGGACCTGACGGTTCCACAGAATACTCGGTCACAATGCAGATTTTACTGTTGATGACAT
CGCTGAGTTTTTTACCTGCGATGCTCATTATGTTGACCTCTTTCACGCGGATCATCATAGTTCTGTCAATATTACGTCAA
GCCATTGGGTTACAACAGACGCCGTCTAATCAAGTCTTAATTGGCATGAGTTTATTCATGACCTTCTTTATTATGGCGCC
GGTGTTTGAGCGGATTTATGACGAAGGGGTTAAGCCTTACATTGAAGAGCAGTTAACCTTGCAGCAAGCGTTTGAAAAAG
GCAAAGAGCCACTCAAAGGTTTTATGTTGGGGCAAGTCAGGACCACTGACTTAAAAACTTTTATCGAAATTTCAGGCTAT
AAGAACATTAAGTCGCCCGAAGAAGCTCCGATGAGTGTGCTGATCCCCGCCTTTATTACCAGCGAGTTGAAAACAGCTTT
TCAAATTGGCTTTATGTTGTTCGTGCCATTTTTAGTGTTAGATCTTGTGGTGGCCAGTATCTTAATGGCCATGGGTATGA
TGATGTTATCTCCTATGATAGTGTCGCTACCGTTTAAGATTATGCTGTTTGTGCTCGTCGATGGTTGGAGCTTAGTCCTA
GGGACATTAGCGAATAGTTTCGGGTAG

Protein sequence :
MTTRILALVGLVILLCMPSAWAADGVLPAVTVTTGPDGSTEYSVTMQILLLMTSLSFLPAMLIMLTSFTRIIIVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFERIYDEGVKPYIEEQLTLQQAFEKGKEPLKGFMLGQVRTTDLKTFIEISGY
KNIKSPEEAPMSVLIPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWSLVL
GTLANSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-13 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-13 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-13 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-15 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_1440 YP_006020023.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-56 65
Sbal175_1440 YP_006020023.1 flagellar biosynthetic protein FliP VFG2016 Protein 4e-51 63
Sbal175_1440 YP_006020023.1 flagellar biosynthetic protein FliP VFG2494 Protein 7e-53 60
Sbal175_1440 YP_006020023.1 flagellar biosynthetic protein FliP VFG2338 Protein 6e-47 53