Gene Information

Name : Sbal175_1433 (Sbal175_1433)
Accession : YP_006020016.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1697165 - 1698502 bp
Length : 1338 bp
Strand : +
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; KEGG: shn:Shewana3_1345 flagellum-specific ATP synthase; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding d

DNA sequence :
ATGCAAAATCGCCAACACCAACTGCTGAATAGGTTGAATCATCATCAGGATAAAGTGCCGCCATTTCGTGCAGTGGCAAG
CGGCCAACTGGTGCGTGTTGTTGGCTTAACCTTAGAGGCGAGCGGTTGCCGCGCGCCTGTGGGCAGCTTATGTTCCATCG
AAACCATGGCGGGCGAGTTAATTGCCGAAGTCGTCGGCTTTGATGGTGAACTCCTTTATTTAATGCCTATCGAAGAATTA
CGTGGGGTATTACCCGGTGCCCGAGTGGTGCCTTTAGGGGAACAAACTGGACTTAATGTCGGCTTGTCCCTGTTAGGACG
CGTGCTCGATGGTAACGGCGTGCCTTTAGATGGTTTAGGTGCGTTGCAGACAGATCAACAAGCGCCAAGACATAGCGCTG
CCATTAATCCCTTATCCCGCCGTGCTATTACCGAGCCGCTGGACGTCGGCGTGCGCGCCATTAATGCCATGCTGACTGTG
GGTAAAGGCCAACGTATGGGCTTGTTTGCCGGTTCTGGTGTGGGTAAGAGTGTGCTCTTAGGCATGATGACCCGCGGTAC
CACTGCCGACATTATTGTGGTTGGGCTGGTGGGCGAGCGTGGCCGTGAAGTAAAAGAGTTCATTGAAGAAATTCTTGGGG
ACAAAGGTCGAGCGCGTTCTGTTGTTGTTGCCGCCCCTGCAGATACCTCGCCGCTGATGCGCTTGCGCGCCTGTGAAACC
TCGACTCGTATTGCCGAATACTTTCGCGATTTAGGTTATAACGTATTGTTATTAATGGATAGTTTAACGCGCTACGCCCA
AGCGCAGCGTGAAATTGCTTTGGCTGTGGGTGAGCCGCCTGCCACCAAAGGCTATCCGCCTTCAGTGTTTGCTAAGCTGC
CGCGTTTAGTTGAGCGCGCCGGCAACGGTGGCCCAGGCCAAGGTTCAATTACGGCATTTTATACTGTGCTGACGGAAGGG
GATGATCAACAGGATCCCATTGCCGATGCATCACGGGCGATTCTTGATGGTCACATAGTCTTGTCACGTTCGCTTGCGGA
CTCTGGGCATTATCCCGCCATTGATATCGAAGCCTCTATTAGCCGGGTAGCACCTATGGTGATCTCCAATGAACACTTGG
AAGCGATGCGCCGCGTGAAACAAACCTATTCCTTGTATCAGCAAAATCGTGATTTGATTTCCATTGGCGCTTATGCCCAA
GGCAGCGATCCTCGAATCGACAATGCGATACGATTACAGCCGGCGATGAATGCTTTTTTACGCCAAACCATGCGTGATGC
ATTCAGTTTTACCGATAGCCAAGTCATGCTCGGGCAACTTGCCGCACAGTGCAAATAA

Protein sequence :
MQNRQHQLLNRLNHHQDKVPPFRAVASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGELIAEVVGFDGELLYLMPIEEL
RGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLGALQTDQQAPRHSAAINPLSRRAITEPLDVGVRAINAMLTV
GKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACET
STRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEG
DDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQ
GSDPRIDNAIRLQPAMNAFLRQTMRDAFSFTDSQVMLGQLAAQCK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-82 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-82 50
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 8e-79 50
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-83 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-83 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-83 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-83 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-83 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-79 49
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-79 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-69 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-69 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-69 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-69 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-69 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-65 48
lscN AAO18044.1 LscN Virulence TTSS locus Protein 7e-73 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-62 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-67 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-67 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-67 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 6e-64 45
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 6e-64 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-64 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-64 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 8e-65 45
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-69 45
escN AAK26715.1 EscN Virulence LEE Protein 1e-69 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-70 45
escN AAL57542.1 EscN Virulence LEE Protein 1e-69 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-70 45
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-70 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-70 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-70 45
escN AAC38383.1 EscN Virulence LEE Protein 5e-70 45
escN AAC31513.1 L0034 Virulence LEE Protein 2e-70 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-69 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-70 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-68 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 4e-69 43
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-70 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-69 42
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-69 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 4e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-123 65
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG2331 Protein 4e-108 62
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-113 61
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG0515 Protein 9e-70 49
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-78 48
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG2144 Protein 1e-76 47
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-76 46
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG0390 Protein 6e-72 46
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG0730 Protein 3e-70 45
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG0812 Protein 1e-70 45
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-61 42
Sbal175_1433 YP_006020016.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-55 41