Gene Information

Name : Sbal175_0132 (Sbal175_0132)
Accession : YP_006018739.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Unknown
Product : helix-turn-helix domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 155840 - 156154 bp
Length : 315 bp
Strand : -
Note : manually curated; PFAM: Helix-turn-helix type 3; KEGG: ppr:PBPRA1807 putative transcriptional regulator; SMART: Helix-turn-helix type 3

DNA sequence :
GTGCACAAAGAAAATACGGTCCCAAAACGCCTTAAAGAAGCAAGAACAAAAGCAGGTATTACTCAGGCGGACTTGGGTGC
AAAAATCGGAATTCACCAAAATTCTGCTAGTAGCCGTATGAATCATTACGAACTCGGTCGTCACACACCTGACATCAACA
CGTTACAGCGTATTGCAGACGAACTAGGGGTGCCGTTAAACTATTTTTTTTGTGAAGATGATGCATCTGCGAAACTTGCT
TGTCTGATAGATCAGTTACCTAAAGAGCAGAAAATAGCTTTGATAAAAAAATTAGAAGCTCAAATAAAGGATTGA

Protein sequence :
MHKENTVPKRLKEARTKAGITQADLGAKIGIHQNSASSRMNHYELGRHTPDINTLQRIADELGVPLNYFFCEDDASAKLA
CLIDQLPKEQKIALIKKLEAQIKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0176 NP_229833.1 transcriptional regulator Not tested VSP-1 Protein 8e-26 63
BCAM0258 YP_002232888.1 repressor protein Not tested BcenGI11 Protein 5e-13 45