Gene Information

Name : Sbal175_1234 (Sbal175_1234)
Accession : YP_006019817.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein mutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1475877 - 1478447 bp
Length : 2571 bp
Strand : -
Note : SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: shw:Sputw3181_1264 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFA

DNA sequence :
ATGAATGTAATTGATACCGATGATTTAGAAAAACATACTCCTATGATGCGTCAGTACTTGACCATGAAAGCAGAACATCA
CGACATGTTGCTGTTTTATCGCATGGGTGACTTCTACGAGTTGTTTTATGACGATGCTAAACGTGCTTCTGAGCTGTTAG
GTATTTCACTCACGGCGCGCGGTAAAAGTGGTGGCGATCCTATCCCCATGGCGGGACTGCCTTACCATGCTGTGGAAGGC
TATCTTGCGAAATTAGTTCAAATTGGTCAATCGGTTGCGATATGTGAACAAATTGGCGACCCAGCAACCTCTAAAGGTCC
TGTTGAGCGTAAAGTGGTGCGTATCGTCACGCCTGGCACCTTAACCGACGAAGCCCTGCTGCAGGAACGCCAAGACAATC
TATTGGCAGCTGTTTATCAAGGTAAAATCGGTTTTGGTTATGCCACTCTGGATGTTTCATCCGGACGTTTTGTGATTGCC
GAGCTCGACACGCGAGAGTCATTAGAAGCTGAATTGCAACGCACTAATCCCGTTGAAATTCTCTACAGTGAAGACTTTGG
CGAACTAGGCCTACTAAACGGTTTTAAAGGTAAACGTCGTCGCCCTGAATGGGAATTTGATTACGACACTAGCATCAAGT
TACTACTGGCTCAGTTTGGCACGAAAGACTTGCATGGTTTTGGCATCGCAGATGCACGTTTATCACTGCAGGCTGCGGGT
TGCTTGATGCAATATGTCAAAGACACACAGCGCACAGCCCTACCCCATATCAATGCCATTACTCGCTTTAATCAAACCGA
TAGCATAGTGCTCGATGCGGCAACGCGCCGAAATCTAGAACTCACTCAAAACCTTGCCGGTGGCCGCGATAATACCTTAG
CCGCAGTATTGGATAACACGGCGACGCCTATGGGCAGCCGCATGTTGCAACGCTGGATCCATCAGCCACTGCGAGATCCA
AAACACATCAAAGCACGCCAACAGGCGGTGACTGAACTACTCGATACCGCCGCCCACGAAGGTTTGCATGAACAGTTAAG
AGCACTTGGCGATATTGAACGTATCATGGCAAGACTCGCGCTGCGTACCGCTCGCCCAAGAGACTTTGCCCGTTTACGTC
AAGCGCTGGGCTTACTACCTGAATTACAACAGAGTTTAAGCACACTGAGCGCGCCGCACACGACTCAATTACGGCAACAC
TTAGGTGAGTTCCCCGCTGAACAAGCCTTACTTGAGCGCGCGATAGTCGATAATCCTCCCATGCTTATCCGCGATGGCGG
AGTGATCCGTGAAGGCTATAACAGCGAATTAGATGAATGGCGCGGTCTTAGCGAAGGTGCGAGCGATTACTTAGTACAAC
TCGAAGCCAGAGAAAAAGAACGTACAGGTATCAACACACTTAAAGTCGGCTATAACCGTGTACACGGCTATTACATCGAA
GTGAGTCGCTTGCAATCCTCGCAAGTGCCACTCAATTACCAACGACGTCAAACCCTTAAGAATATGGAGCGTTATATCAC
GCCCGAACTTAAGGAGTACGAAGAAAAAGTGCTCTCGAGCCAAGGTAAAGCACTGGCACTCGAAAAGCAGTTATGGGAAC
AATTATTTGATCTTATTCTGCCAAAATTACATGAATTACAAGCTTTTGCTCGAGCGGCGGCTGAGCTTGATGTGTTAAGT
AACTTTGCTGAGCGCGCCGAAACCTTAGGCTACACTTGCCCAGAGCTGAGCCAAGATATCGGCGTACAGATAGAGGCTGG
TCGCCACCCAGTGGTGGAACGTGTGAGTCAAACACCGTTTATCGCTAACCCAGTCACCTTGCACAATCAAAGACGTATGT
TGATTGTCACCGGACCTAACATGGGCGGTAAATCGACCTATATGCGTCAAGTCGCTTTGATCACGCTGATGGCCCACATT
GGCTGTTTTGTGCCAGCAGATCACGCACTGATAGGCCCTATCGATCGTATCTTTACCCGTATTGGCGCCTCTGACGATCT
GGCCTCTGGCCGTTCAACCTTTATGGTAGAAATGACAGAAACCGCCAACATTCTACACAACGCCACCGCCAGTAGCTTAG
TGTTAATGGATGAAATCGGCCGCGGCACATCCACCTATGATGGTTTATCACTTGCTTGGTCGGCAGCAGAGTATTTAGCC
CAGCAAGTCGGCGCTATGACCCTATTCGCCACCCATTATTTTGAATTAACTCAGTTACCTGAATTAATGGCTGGTGTTTA
CAATGTGCACCTTGATGCCATTGAGCACGACGATACCATCGCCTTTATGCATGCAGTGCAAGAAGGCGCCGCCAGTAAAA
GCTACGGCTTACAAGTTGCGGCGCTTGCCGGCGTACCAAACAAAGTGATTAAAGCCGCTAAACATAAGTTGCAGCAATTG
GAGAGTCGCGATCATCAAGCTGAAGGAACGAGGACGCCTATTCAAAGCTTACTCGCGTTACCTGAACCAGTTGAGAATCC
AGCGTTAACGAAGTTAAGTAGCATTAATCCCGATAACTTAACGCCAAAGCAGGCACTTGATTTGCTCTATGAGCTGAAAC
GTCTGAGCTAA

Protein sequence :
MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGLPYHAVEG
YLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNLLAAVYQGKIGFGYATLDVSSGRFVIA
ELDTRESLEAELQRTNPVEILYSEDFGELGLLNGFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGIADARLSLQAAG
CLMQYVKDTQRTALPHINAITRFNQTDSIVLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDP
KHIKARQQAVTELLDTAAHEGLHEQLRALGDIERIMARLALRTARPRDFARLRQALGLLPELQQSLSTLSAPHTTQLRQH
LGEFPAEQALLERAIVDNPPMLIRDGGVIREGYNSELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLILPKLHELQAFARAAAELDVLS
NFAERAETLGYTCPELSQDIGVQIEAGRHPVVERVSQTPFIANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHI
GCFVPADHALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQVGAMTLFATHYFELTQLPELMAGVYNVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPNKVIKAAKHKLQQL
ESRDHQAEGTRTPIQSLLALPEPVENPALTKLSSINPDNLTPKQALDLLYELKRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_1234 YP_006019817.1 DNA mismatch repair protein mutS VFG0562 Protein 0.0 68