Gene Information

Name : Sbal175_1202 (Sbal175_1202)
Accession : YP_006019785.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.193
Position : 1434503 - 1435657 bp
Length : 1155 bp
Strand : +
Note : TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: spc:Sputcn32_2778 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding

DNA sequence :
ATGAGCTTGAACATAAGTTGGTCCGTACTCGATACCCAAATGATGAGCCGCGCGATTCAATTGGCGCGCAAAGGCTTTTA
CACCACGAGACCCAATCCCAGTGTGGGCTGCGTTATCGTTAAAGATAATCAGATTGTCGGCGAAGGTTATCATCAAAAAG
CGGGTGAGCCCCACGCCGAAGTGCATGCGCTACGCATGGCTGGCGAACACGCTCGCGGCGCAACAGCCTATGTCACCTTA
GAGCCCTGCAGCCATTATGGTCGCACGCCACCCTGTGCCTTGGCGCTGATCAATATTGGCGTTAAGCGTGTGGTGGTGGC
GGTGGAAGATCCAAATCCGCAAGTGGCTGGTCGCGGTATTCAAATGCTGCGCGACGCCGGCATTGAAGTGGATGTGGGAT
TACACCGCGATGAAGCTTATGCCTTGAATTTAGGCTTTATGAAGCGGATGGAATCAGGTTTACCCAGAGTTACAGTCAAA
TTAGCTGCGAGTCTCGATGGTAAAACCGCGCTGTCTAACGGTGTGTCTAAATGGATTACCGGGCCTGAATCTCGCCGCGA
CGTGCAGCGCTTACGCTTACGTTCCTGCGCGTTGGTCACTGGGATTGAAACCATACTGGCTGACGATCCCTCACTCAATG
TGCGATATCAAGAACTTGGCGGCATAAAAGACAGCGTAACCGAGGCGCAATTACTGCAGCCATTAAGAGTCATACTCGAC
AGTCGCGCCCGTTTGCCGTTATCGGCTGCCTGTTTGGCTATCGTATCGCCGATACTCTTGGTCTCGACCGTGGCTTATCC
CGCAGAGTTTCAAGCACAATTGCTCTCCCATGTGAGTTGCCTCGTGTTACCTGCAATTGCAGGTCGCGTATCCTTACCTG
AACTATTAAGCTATTTAGGCCAAAGTTGTAATCACGTGCTGGTGGAAGCGGGTGCAACCTTAGCGGGCGCTTTTTTAGCA
GAGGGGCTGGCCGATGAATTAATGCTATACCAAGCGATGAAAATCCTTGGTGGGCAAGGGCGCAATCTGCTGCAGCTACC
CGATTATAAAACCATGGCGCAAATTCCTGCATTAACTTTGGTGGATGAGCGCAAATTAGGGCCAGATACCCGTTTAATCT
TGAGCGTTAAGCTTGATACCTCTTTAATTAATTAA

Protein sequence :
MSLNISWSVLDTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEHARGATAYVTL
EPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEVDVGLHRDEAYALNLGFMKRMESGLPRVTVK
LAASLDGKTALSNGVSKWITGPESRRDVQRLRLRSCALVTGIETILADDPSLNVRYQELGGIKDSVTEAQLLQPLRVILD
SRARLPLSAACLAIVSPILLVSTVAYPAEFQAQLLSHVSCLVLPAIAGRVSLPELLSYLGQSCNHVLVEAGATLAGAFLA
EGLADELMLYQAMKILGGQGRNLLQLPDYKTMAQIPALTLVDERKLGPDTRLILSVKLDTSLIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-71 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-71 51