Gene Information

Name : sdr (RIA_1062)
Accession : YP_006017524.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Unknown
Product : Sdr
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1040137 - 1040880 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :
ATGAGATTATTAGAAGGAAAAGTAGCCCTCATTACAGGAGCTACCAGAGGTATAGGAAAAGGTATTGCCGAGATTTTCGC
AGCGCAAGGAGCACAGGTGGCATTCACTTATGCAGGGTCTGTGGATAAGGCACAAGCTCTAGAGGCAGAACTTAATAAGA
CAACCAAAGCTAAGGCTTATCAAAGCGATGCTTCGGATTATGAAGGCTCTCAAAAGCTCGTAGAAGAAGTTTTAGCAGAG
TTTGGTAAAATAGATATTTTGGTTAATAATGCAGGGATTACCAAAGACAACCTAATGTTGCGTATGTCTAAAGAAGATTG
GGATACTATTATAAAGGTTAATTTAGACTCGGTGTTTAACCTAACCAAAGCTGTTATCAAACCAATGATGAAAGCAAGAG
GTGGTTCTATCATCAATATGACTTCCGTGGTGGGTATCAAAGGAAATGCAGGTCAGGCGAATTATGCAGCCTCTAAAGCT
GGGGTAATCGGATTTACTAAATCTATTGCGTTAGAATTAGGCTCCAGAAATATCCGTTGCAACGCCATCGCTCCAGGTTT
TATAGAAACCGAAATGACGGCGGCACTAGACGAAAAAACAGTACAAGGTTGGAGAGAAACCATTCCGTTAAAAAGAGGAG
GTCAGCCAGAAGATGTAGCTAATGCTTGTGTGTTTTTAGGTAGCGAGTTATCTAGCTATGTTACAGGGCAGGTGCTTAAT
GTAGATGGTGGAATGCTTACCTAG

Protein sequence :
MRLLEGKVALITGATRGIGKGIAEIFAAQGAQVAFTYAGSVDKAQALEAELNKTTKAKAYQSDASDYEGSQKLVEEVLAE
FGKIDILVNNAGITKDNLMLRMSKEDWDTIIKVNLDSVFNLTKAVIKPMMKARGGSIINMTSVVGIKGNAGQANYAASKA
GVIGFTKSIALELGSRNIRCNAIAPGFIETEMTAALDEKTVQGWRETIPLKRGGQPEDVANACVFLGSELSSYVTGQVLN
VDGGMLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-34 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-35 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-34 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-35 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 5e-35 42