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Name : RIA_1053 (RIA_1053) Accession : YP_006017515.1 Strain : Riemerella anatipestifer RA-GD Genome accession: NC_017569 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 1029352 - 1031859 bp Length : 2508 bp Strand : - Note : - DNA sequence : ATGATGAGTAATAAATTTTCGGGAGGATTGGATAAAGTCCTCAAAGCGAGTGCTAAAGAAGCAAAAAGATTAGAAAGTGA ATTTCTTAATACCGAACACCTTCTTTTAGGGATTATTAAAACAGATAATTCTGCGAGGGAAATATTACAGAATTTACAGG TAGATTTAACCCAAATAAGACGAAAGATAGAAGCTTTAAACTCTTTAAGTTCTAATGTTTTTCCACCGAAAGAAATGGAG GTAATTCCATTTACTAAAATGGCAGATTATGCACTTAAAAGAGCTGATTTGGAAAGTAAAAGTTACCGTTCAGAACATAT CAATACGGTTCACTTGCTATTGGGTATTCTTTACAAAATGGAAGACCCTACCACTCAGATTCTAGAAAGTTATGATGTAG ATTATGAGGCGGTTACTAAAGAGTATCGCACGATGTTAGAGCAGAACGGGATTTCGCCTAAAATGAGTAGTGAGTATGAT GATAGTAATGAGGAAAGAGAAAGCTTTGGGCAACCTAATAAATCAAGTAGCAGTATCGGAACTGCAAAAAGTAAAACACC TACCTTGGATAATTTCGGTAGAGATTTAACGGCTTTGGCTAAGGAAGGAAGGTTAGACCCAGTAATTGGTAGGGAAAAAG AGATAGAACGAGTATCACAAATTCTGTCCAGAAGAAAGAAAAATAATCCACTCCTTATTGGAGAGCCAGGTGTGGGGAAA TCTGCTATTGCAGAGGGGTTAGCATTAAGGATACATCAGAAAAGAGTTTCTCGTGTATTGTACAACAAGCGTGTAATTAC TTTAGATTTAGCAAGTTTGGTTGCGGGTACAAAGTACAGAGGTCAGTTTGAGGAAAGAATGAAAGCAATTATGACAGAAC TAGAAAAAAATAGAGATGTCATTTTGTTCATAGACGAGTTGCATACTATTGTAGGGGCGGGAGGTTCTACGGGAAGTTTA GATGCGTCTAATATGTTCAAACCTGCTTTGGCAAGGGGAGAAATACAATGCATTGGAGCTACTACTTTAGATGAGTACAG ACAGCATATAGAGAAAGATGGTGCTTTGGAGAGACGTTTCCAAAAAGTAATGGTAGAGCCGACTTCCATAGAAGAAACCA TTCAGATTTTGTATCAAATTAAAGATAAGTACGAAGAACATCACAATGTAATTTATACAGATGACGCTATCAAGGCTTGT GTTAATCTTACCTCTAGATACATCACAGATAGATTTTTACCAGATAAAGCCATAGATGCTATGGACGAAGCGGGTTCTAG GGTTTACATTAAAAATATGAAAGTCCCTACCGAACTTGTAGATTTTGAAGCCAAAATAGAAGAAGTTAAAGACCTTAAAC AAAAAGCGGTTAAAGCTCAAGATTACCTAGAAGCGAGAAGGCTTAAAGATGAAGAAGAGCGTTTACAAATAGAACTTAAT TTGGTTCAGGAAGAATGGGATAGAAATGTAAAAGAGATGAAAGAAACGGTTACGGAGGAGAATGTCGCAGAAGTAGTATC AATGATGAGTGGTGTTCCTGTAACTAAAGTTGGCAAAAACGAACTTGATAAACTTGCCGAAATGGACAAAAACCTTAATG GTAAGGTAATTGGTCAAGAAGAAGCCGTTAAAAAAGTAGTGAAATCTATCCAAAGAAATAGAACAGGACTAAAAGACCCT AACCGTCCTATTGGTACTTTTATTTTCCTAGGAACAACAGGAGTTGGTAAAACAGAGCTAGCTAAAGTGATGGCTAAGGA ATTATTCAACTCCGAAGATGCACTCATAAGAATAGATATGAGCGAATATATGGAGAAATTTGCGGTGTCTAGACTTGTAG GGGCGCCTCCAGGATATGTGGGGTATGAAGAAGGCGGACAACTTACAGAAGCCGTTAGAAGAAAGCCTTATTCGGTAGTG CTTTTAGATGAGATAGAAAAAGCTCACTCTGATGTGTTTAACCTATTGTTGCAGATTTTAGATGAAGGTTTCGTAACCGA TAGTTTGGGTAGAAAAATAGACTTTAGAAATACGATTGTTATTTTGACCTCTAACATTGGTACTCGTCAACTGAAAGATT TTGGTGATGGTGTAGGCTTCGGAACTTCAGCGAAAAAATCTAGTACCGATGCCCACGCAAGAAGTACGATAGAGTCGGCT CTTAAAAAAGCATTTGCTCCGGAGTTTTTAAATAGAATAGATGATATTATTATTTTCAACGCTTTAGAGAAAGAAGATAT TAAGAAAATTATAGATTTAGAACTTAATAAACTTTACCAAAGATTAAGCAAACTAGGTTATACCGTAAGTCTTACAGAGG AAGCCAAGGACTTTATTGCTGAGAAAGGTTGGGATAAAGACTTCGGTGCTAGACCACTGAAAAGAGCGGTACAAAAGTAC ATAGAAGATTTACTAGCCGAGCTTTTGGTAACCAAACAATTAAGCGAAGGCGAAAGTGTAGTCTTAAAATTAAATGAAGC TAAAGACGCTTTAGAAAAACAAAATTAA Protein sequence : MMSNKFSGGLDKVLKASAKEAKRLESEFLNTEHLLLGIIKTDNSAREILQNLQVDLTQIRRKIEALNSLSSNVFPPKEME VIPFTKMADYALKRADLESKSYRSEHINTVHLLLGILYKMEDPTTQILESYDVDYEAVTKEYRTMLEQNGISPKMSSEYD DSNEERESFGQPNKSSSSIGTAKSKTPTLDNFGRDLTALAKEGRLDPVIGREKEIERVSQILSRRKKNNPLLIGEPGVGK SAIAEGLALRIHQKRVSRVLYNKRVITLDLASLVAGTKYRGQFEERMKAIMTELEKNRDVILFIDELHTIVGAGGSTGSL DASNMFKPALARGEIQCIGATTLDEYRQHIEKDGALERRFQKVMVEPTSIEETIQILYQIKDKYEEHHNVIYTDDAIKAC VNLTSRYITDRFLPDKAIDAMDEAGSRVYIKNMKVPTELVDFEAKIEEVKDLKQKAVKAQDYLEARRLKDEEERLQIELN LVQEEWDRNVKEMKETVTEENVAEVVSMMSGVPVTKVGKNELDKLAEMDKNLNGKVIGQEEAVKKVVKSIQRNRTGLKDP NRPIGTFIFLGTTGVGKTELAKVMAKELFNSEDALIRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVV LLDEIEKAHSDVFNLLLQILDEGFVTDSLGRKIDFRNTIVILTSNIGTRQLKDFGDGVGFGTSAKKSSTDAHARSTIESA LKKAFAPEFLNRIDDIIIFNALEKEDIKKIIDLELNKLYQRLSKLGYTVSLTEEAKDFIAEKGWDKDFGARPLKRAVQKY IEDLLAELLVTKQLSEGESVVLKLNEAKDALEKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-168 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RIA_1053 | YP_006017515.1 | ATPase | VFG0080 | Protein | 4e-150 | 51 |
| RIA_1053 | YP_006017515.1 | ATPase | VFG0079 | Protein | 0.0 | 48 |
