Gene Information

Name : RIA_0873 (RIA_0873)
Accession : YP_006017353.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Virulence
Product : Nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 847330 - 848361 bp
Length : 1032 bp
Strand : -
Note : -

DNA sequence :
ATGGAGAAGAAAACTTACCTTGTTACAGGAGGAAGCGGTTTTATTGGTTCTCATCTTGTGGAAGCTTTATTGAAAAACGG
ACATTTTGTCATCAATGTTGATAATTTTGATGATTTCTACAACTATAAAACAAAAATAAATAATACTCTAGAATCTTTAG
GAATAACAACAAATTTTGACTTTGAAAATAAAAATTTGGATATTAAAAAGTTAGCTTCTTTGGTTAATAAAGGTAATTAT
AAGTTTTATTATCAGGATATTAGAGATAAAGAAGGACTAGAAAAAATCTTTAAAAATCATCGTCCCGACGTGGTGATTCA
CTTGGCGGCTTTGGCAGGTGTCCGTCCTTCCATAGAAAGACCTTTGGAATATCAAGAAGTAAATATTAAAGGTACGATGA
ATATTTGGGAAGTGGCTAAAGATTTAGGTATTTGTAAATTTGTAATAGCTTCTTCTTCTAGTGTTTACGGTAATAATGAA
AAAATTCCATTTTCGGAAGAGGATAATGTGGATAGACCAATTTCGCCTTATGCAGCCACTAAAAAATGTGTGGAGGTTTT
AGGGCATACTTACCATCATTTGTATGGTATGGATATGGTTCAGTTGAGGTTTTTTACAGTCTATGGTCCTAGGCAACGAC
CTGATTTAGCAATACATAAATTCGCTAAAATAATTAAAGATAATAAGCAAGTGCCATTTTACGGCGATGGCAATACGGCT
AGAGATTATACCTTTGTTGATGATATTATTGATGGTATAATGAAATCTATAAAGTATGTAGAAGAGAATGCAGGAGTGTA
TGAAATTTTCAATTTAGGTGAAAGTGAGGTAATTCCTCTACATAAGATGCTGTCAACCATAGAGGAAGAGCTAGGCGTTA
AGGCTACTCTTAATAAATTACCAATGCAGGCAGGAGATGTGCAAAAAACCAATGCAGATATTAGAAAGGCACAACAGAAA
ATAGGCTATGCACCAACTACAAACTTCCAAAATGGCATAAAAAAGTTTGTGGAATGGTTTTTGAGAAAGTAG

Protein sequence :
MEKKTYLVTGGSGFIGSHLVEALLKNGHFVINVDNFDDFYNYKTKINNTLESLGITTNFDFENKNLDIKKLASLVNKGNY
KFYYQDIRDKEGLEKIFKNHRPDVVIHLAALAGVRPSIERPLEYQEVNIKGTMNIWEVAKDLGICKFVIASSSSVYGNNE
KIPFSEEDNVDRPISPYAATKKCVEVLGHTYHHLYGMDMVQLRFFTVYGPRQRPDLAIHKFAKIIKDNKQVPFYGDGNTA
RDYTFVDDIIDGIMKSIKYVEENAGVYEIFNLGESEVIPLHKMLSTIEEELGVKATLNKLPMQAGDVQKTNADIRKAQQK
IGYAPTTNFQNGIKKFVEWFLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1I AAA64648.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-56 41