Gene Information

Name : xerD (RIA_0790)
Accession : YP_006017276.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Unknown
Product : XerD protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 765018 - 765929 bp
Length : 912 bp
Strand : +
Note : -

DNA sequence :
ATGGATTGGAACGAGCGAATACAAGACTTTGCAAATGCTCTAAAGTTTGAAAAAAACCTTTCAAACAACACCATTGATGC
CTATACTAGAGATATAAAAAAACTGCAATATTTCGCTGAAAATAAACTAAACGATACTTCCGCCTTAGATATTTCTTACG
AACAAATACAAGAATATCTTTACCAAATATCTAAAAACTACACCAATGAAAGAAGTCAATCTAGATGGATTTCTTCTATA
AAAGCTTTTTTTAAATTTCTACACGAAGACGAATTAAGGGCTGATAACCCTGCAAGACTACTCGAAACTCCAAAGCTAGG
TTTATACCTCCCTGATACTTTAAGTTTTGAGGAAATAGAAAGTCTTATAGAGGCTATAGATAAAACAACCTCTTTAGGTA
AAAGAAACCATACCATTATAGAAACTCTCTATGGTTGTGGACTGAGGGTTTCCGAATTGGTAGAACTAAAAATTTCTAAC
CTCAACTTTGAAGAAGAATTTATAATTGTGGACGGAAAGGGTGGCAAAACTCGCCTTGTTCCTTTAGCTCAATATACAGC
GGAACTTATCAAGGATTATCTTTTAGAAGTTAGGTCAGAAATAAAAATCAACCCAAAGCATTCTGATATTTTATTTTTGA
ATAGACGAGGCTCTAAGCTTACTCGTGTGATGGTATTTATCATCATTAAAGATTTAGCACTACAAGCCAACATCAAAAAA
AATATTTCTCCACATACCTTTAGACATTCTTTCGCTACGCATCTACTAAAAAACGGTGCTGACCTTAGATACATTCAGGA
AATGCTGGGACACTCTAGCATTACAACCACAGAAATTTATACCCATCTAGACAACGAAGACCTCCGAGAAACCATTATGA
AATATCACCCAAGAAACAATACTAATTTTTAA

Protein sequence :
MDWNERIQDFANALKFEKNLSNNTIDAYTRDIKKLQYFAENKLNDTSALDISYEQIQEYLYQISKNYTNERSQSRWISSI
KAFFKFLHEDELRADNPARLLETPKLGLYLPDTLSFEEIESLIEAIDKTTSLGKRNHTIIETLYGCGLRVSELVELKISN
LNFEEEFIIVDGKGGKTRLVPLAQYTAELIKDYLLEVRSEIKINPKHSDILFLNRRGSKLTRVMVFIIIKDLALQANIKK
NISPHTFRHSFATHLLKNGADLRYIQEMLGHSSITTTEIYTHLDNEDLRETIMKYHPRNNTNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-49 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-49 41