Gene Information

Name : RIA_0357 (RIA_0357)
Accession : YP_006016881.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Resistance
Product : Co/Zn/Cd efflux system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 308014 - 308811 bp
Length : 798 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGAAAACGACATTTAAAATATCAAAAATGGACTGCCCATCCGAAGAACAAATGATACGGATGAAACTTGCCGACTT
GACAAACATCAACTCGTTGGACTTTGATATACCGAACAGACAACTGACCGTTTTTCACACTGACAATCACGACCAAATTT
TTCAACGACTTGACAACTTAAAGTTTGACACTTCTCTTATTGACAGCGTTTCGGCAGACAATTACATTTCAACAACCGAC
AACACAGACCGAGAAAAAAAATTACTTTGGCAAGTTTTAGCCATCAACTTTTTCTTTTTTGCACTTGAACTTGCGACAGG
TTTTATTTCTAACTCAATGGGACTTGTAGCCGACAGTTTGGATATGCTTGCCGACAGTATTGTTTACGGACTTGCACTTT
TTGCAGTTGGTGGGACAATGACACGAAAAAAGAACATTGCAAAATCGGCAGGTTATTTTCAGTTGACACTTGCGGTTTTT
GGTTTTATAGAAGTTATCAGACGATTTGTTGGAACGGAAACAATTCCAGTATTTCAGACAATGATAATTATTTCAATTCT
TGCTCTTATTGGAAACGGACTGTGTTTGTATTTACTGCAAAAAAGTAAAAGCAAAGAAGCACATATGCAAGCAAGTATGA
TTTTCACATCTAATGACGTAATTGTAAACCTTGGAGTAATTGTAGCAGGCGGACTTGTTTACTTGACAAACTCAAAATAT
CCTGACCTTATCGTTGGGACAATTGTATTTTTCATCGTTGGACAAGGAGCATTTAAAATCTTGAAACTATCAAAATGA

Protein sequence : 
MQKTTFKISKMDCPSEEQMIRMKLADLTNINSLDFDIPNRQLTVFHTDNHDQIFQRLDNLKFDTSLIDSVSADNYISTTD
NTDREKKLLWQVLAINFFFFALELATGFISNSMGLVADSLDMLADSIVYGLALFAVGGTMTRKKNIAKSAGYFQLTLAVF
GFIEVIRRFVGTETIPVFQTMIIISILALIGNGLCLYLLQKSKSKEAHMQASMIFTSNDVIVNLGVIVAGGLVYLTNSKY
PDLIVGTIVFFIVGQGAFKILKLSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 1e-48 44
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 1e-48 44
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 1e-48 44
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 1e-48 44
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 1e-48 44
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 1e-48 44
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 1e-48 44