Gene Information

Name : RIA_2139 (RIA_2139)
Accession : YP_006018518.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Resistance
Product : Beta-lactamase class D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2149654 - 2150418 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
TTGGTATTCTCAAAAATAGACTTTAATATGAAAACAAAAATAGTAGGCACAGTTATTTTGATTTTTATAGAATTCATTAG
TTGCCATCACAATAAGAGTAAAAATAATTGGAAGTCTTTTTTTAAAGATAATAATGTAAACGGGACATTTGTACTAAAAA
AGTTAAATTCAAATGAAACTCTAATTTACAATCAAGAGAGAAGTGATAAAAAATATACACCTGCTTCCACCTTTAAAATT
CTAAACTCTATGATTGCATTACAGGTATTGTCTGTTACAGATGTAAATGACACAATTCAATGGGACGGAATAGACCGAGG
ATATGAATCTTGGAATAAAGATCAAACCATGAAATCCGCATTGCCTATTTCATGTGTATGGTTTTACCAAGAATTGGCTC
GTAGAACGGGACAAAAAGAAATGCAAAAATGGCTTACAAAATCAAACTATGGGAATAAGAAAATTGGGAGTAAAATTGAC
AAATTTTGGCTTGATGGTACTCTTGCTATTTCGGCAAATGAACAAATTGTTTTTCTTGAAAAACTCATAAATAATAAATT
ACCATTTGATAAAAACATTCAAGAGAGCGTAAAAAAAATAATGATTACAGACTCTACAGAACATTATATCATTCACTCAA
AAACAGGCTGGGGAAACAATATAGGCTGGAATATAGGTTATATAGAAACAAAAAATAATATTTGGATTTTTGCATTGAAT
ATGGATATGAATGACATAAAAATGGCAGATATAAGAAAAAAATAA

Protein sequence : 
MVFSKIDFNMKTKIVGTVILIFIEFISCHHNKSKNNWKSFFKDNNVNGTFVLKKLNSNETLIYNQERSDKKYTPASTFKI
LNSMIALQVLSVTDVNDTIQWDGIDRGYESWNKDQTMKSALPISCVWFYQELARRTGQKEMQKWLTKSNYGNKKIGSKID
KFWLDGTLAISANEQIVFLEKLINNKLPFDKNIQESVKKIMITDSTEHYIIHSKTGWGNNIGWNIGYIETKNNIWIFALN
MDMNDIKMADIRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ACICU_00226 YP_001844885.1 Beta-lactamase class D Not tested AbaR20 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RIA_2139 YP_006018518.1 Beta-lactamase class D HQ700343.1.gene1.p01 Protein 6e-30 43
RIA_2139 YP_006018518.1 Beta-lactamase class D AY500137.1.gene1.p01 Protein 3e-29 41
RIA_2139 YP_006018518.1 Beta-lactamase class D AF024602.1.gene3.p01 Protein 4e-27 41
RIA_2139 YP_006018518.1 Beta-lactamase class D HM015773.1.gene6.p01 Protein 6e-29 41