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Name : RIA_2034 (RIA_2034) Accession : YP_006018422.1 Strain : Riemerella anatipestifer RA-GD Genome accession: NC_017569 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2029092 - 2030792 bp Length : 1701 bp Strand : + Note : - DNA sequence : ATGATGCATTTATCAGAACAAGAAATTATCCGTAGAGAAAAGTTAGAAAAACTTTCTCAAATGGGCATAAATGCCTTTCC GGCAGACGAATATGCTATTACACATACCACACAATCTATAAAAGAAAATTTTCAAGAAGGAAGCAAGGTTAAAATCGCTG GTAGGCTAATGTCTAGAAGAATCCAGGGGAAAGCTTCTTTTGCCGAATTACAAGATAGCGAAGGCAGAATACAAGTGTAT TTTAATAGAGATGAAATTTGTCCTGAGGAAGACAAAACCCTTTATAACGAAGTTTATAAGCATCTTTTAGACATTGGAGA TATTATAGGCGTAGAGGGAGAATTGTTCAAAACTCAAGTAGGAGAAATGACGGTAATGGTTAAAAATTTCACTCTATTAA CCAAAACTCTTCGTCCACTTCCTCAACCAAGAACTGATGAAAATGGTGTGGTACACGATGCTTTTAACGACCCTGAACTT CGTTATAGACAGCGCTACGTGGATCTTACAGTAAACCCACATGTTAAAGAAATTTTTGTAAAAAGAACGAAATTGTTTAA CGCAATGCGTGGGTTCTTTAATGACGCTGGATATTTTGAGGTAGAAACGCCTATTTTACAGGCTATTCCAGGTGGAGCTT CAGCAAGACCATTCATTACACATCATAATGCCTTGGATATTCCACTATATATGAGAATTGCTAACGAGCTTTATCTTAAA AGACTTATCGTAGGCGGGTTTGATGGGGTGTATGAGTTCTCCAAAAACTTCCGTAACGAAGGTATGGACCGAACTCACAA CCCTGAGTTTACAGCCATGGAGATTTATGTGGCGTACAAGGATTACAACTGGATGATGGATTTTACCGAAAGACTGTTGG AGCATTGTGCTACTGCGGTGAATGGGAAACCTGAATCTCAGTTTGGCGAACATACCATCAATTGGAAAGCCCCTTACCCA AGAATTTCCATGACGGACGCCATTCGGAAATTTACGGGGTTTGATATTACGGGAAAAACCGAAGAGGAACTTAGAACCTT TGCCAAATCCATCGGTATTGAAGTGGATGACACGATGGGGAAAGGCAAGCTCATTGATGAAATTTTCGGAGAGAAGTGCG AAGGTAACTTTATTCAGCCGACCTTCATTACTGACTACCCTATCGAAATGTCGCCGCTTACTAAAAAGCACAGAAGCAAA GAGGGCTTAACCGAAAGATTTGAGTTGATGGTTTGTGGAAAAGAAATTGCGAATGCTTACTCTGAGCTTAACGACCCTAT TGACCAAAGAGAACGTTTTGAAGAGCAACTTAAACTTTCAGAAAAGGGTGATGACGAAGCGATGTTTATCGACCAAGATT TCCTAAGAGCTTTAGAATACGGTATGCCGCCTACGGCTGGTTTGGGTATCGGTATGGACAGGTTGGTGATGTTCTTAACG AATAATGCTTCTATTCAGGAGGTTTTATTCTTCCCTCAAATGAGACCAGAAAAGGCTCAGCCTAAAGTAGAGATTGGAGA AAATGAAGAAATTATCCTTGGTATTCTTAATAAAAACAACGGTAAAATGCTGATAGCTGACTTAAAAACTCAATCAGGCT TAAGTGGAAAGAAATGGGATAAGTCTTCTAAACTATTAGTTTCTAATAATTTAATTTCTCTAGTAACTGAAGGTGAGGAT AAATATTTCCAAATAGTTTAA Protein sequence : MMHLSEQEIIRREKLEKLSQMGINAFPADEYAITHTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVY FNRDEICPEEDKTLYNEVYKHLLDIGDIIGVEGELFKTQVGEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPEL RYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQAIPGGASARPFITHHNALDIPLYMRIANELYLK RLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYP RISMTDAIRKFTGFDITGKTEEELRTFAKSIGIEVDDTMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRSK EGLTERFELMVCGKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLT NNASIQEVLFFPQMRPEKAQPKVEIGENEEIILGILNKNNGKMLIADLKTQSGLSGKKWDKSSKLLVSNNLISLVTEGED KYFQIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-101 | 44 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RIA_2034 | YP_006018422.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-102 | 44 |
