Gene Information

Name : RIA_1955 (RIA_1955)
Accession : YP_006018352.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Unknown
Product : Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1955080 - 1955787 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence :
ATGATAGATAAAACAGTTAAAAATGTACAAGAAGCCTGCGAAGGTATCAAAGACGGAATGACCATTATGCTTGGCGGATT
TGGGCTATGCGGAATCCCAGAGAATAGCATTGCTGAGCTGGTAAGAAAAAATGTAAAAAATCTCACTTGTATTTCTAATA
ATGCAGGTGTTGATGATTTTGGACTAGGACTTTTACTTCAAAATAAACAAATAAAAAAAATGATTTCTTCCTATGTGGGA
GAAAATGCCGAATTTGAAAGACAACTACTAAGCGGAGAGTTAGAGGTAGAACTTATCCCACAGGGGACTCTAGCGACTAG
ATGTTTGGCTGCGGGGTATGGTATGCCTGCTTTTTTCACACCTGCTGGCGTAGGGACAGAAGTTGCCGAAGGTAAAGAGG
TCAGAAACTTTAATGGTAAAGATTATCTTTTAGAATATGCTTTTGATGCTGATTTTGCCATCGTTAAAGCTTGGAAAGGC
GACACAGCAGGAAATTTAATATATCGTTCTACTGCTAGAAATTTTAATCCACCAATGGCAATGGCTGGTAAAATTACGAT
TGCAGAGGTAGAAGAACTTGTACCTGCAGGAACATTAGACCCTGACCAAATACATACTCCTGGAATTTATGTACACCGTA
TTTTCCAAGGAGAAAATTACGAGAAGAGAATAGAGCAAAGAACCGTAAGAAAAACCAATCAAGACTAA

Protein sequence :
MIDKTVKNVQEACEGIKDGMTIMLGGFGLCGIPENSIAELVRKNVKNLTCISNNAGVDDFGLGLLLQNKQIKKMISSYVG
ENAEFERQLLSGELEVELIPQGTLATRCLAAGYGMPAFFTPAGVGTEVAEGKEVRNFNGKDYLLEYAFDADFAIVKAWKG
DTAGNLIYRSTARNFNPPMAMAGKITIAEVEELVPAGTLDPDQIHTPGIYVHRIFQGENYEKRIEQRTVRKTNQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 1e-35 48