|
Name : RIA_1819 (RIA_1819) Accession : YP_006018228.1 Strain : Riemerella anatipestifer RA-GD Genome accession: NC_017569 Putative virulence/resistance : Unknown Product : S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase) Function : - COG functional category : - COG ID : - EC number : - Position : 1814959 - 1816008 bp Length : 1050 bp Strand : + Note : - DNA sequence : ATGAAAACTTCTGATTTTAATTTCAATCTACCACCAGAGCTTCTTGCGGAACATCCTTCGGAGCACAGAGACGAGGCAAG ACTTATGGTTCTTAATAGAAAAAATCAAACCATAGAGCATAAACTTTTTAAAGATGTCATAGATTATTTTGATGAAAATG ATTTGTTTATCTTTAACAATACTAAAGTTTTCCCAGCGAGATTGTTTGGGAATAAAGAAAAAACAGGTGCTAAAATAGAA GTTTTCCTTTTAAGAGAGCTAGACAAGGATACTCGTGTTTGGGATGTACTAGTAGATCCTGCTAGGAAAATAAGAATTGG TAACAAACTATTCTTTGACGAAGATGAGTCTTTAGTGGCGGAAGTTATAGATAACACAACTTCTAGAGGAAGAACACTAA GATTCTTGTACGATGGAAGCTACGAGGAATTTCGTGCTAAATTAAAGGAGCTGGGGGAAACACCTCTACCGAAATATATC AAAAGAGAAGTAGAGCCAGAAGATGCAGAAAGATACCAAACAATCTATGCTAAAAAGGAGGGAGCGGTAGCAGCACCTAC TGCGGGGCTTCATTTCTCTAAACATCTAATGAAAAGATTAGAGATAAAAGGAATTAACTTTGCCGAAGTAACGCTACATG TGGGCTTAGGGACTTTTAACCCAATAGAGGTAGAAGATTTATCAAAGCACAAAATGGAGTGTGAAGAGGCGTTCATCGAC CAAAAAAATGCGGATATTATCAACAAAGCTATAGATGAAGATAGACGCATCTGTGCAGTAGGAACTACTACGATGAGAAC CATAGAAACTTCGGTTTCGTCTAATAGAAAGCTAAGTGCTTATCACGGTTGGACGAACAAGTTTATTTATCCTCCGTACG ATTTTGCGGTAGCAGATTCTATGATTACCAATTTCCACACACCCAAATCTACCCTTATTATGATGATTGCTGCATTTGCA GGTAAAGATTTTGTAATGCACGCCTACGAAGAGGCAGTTAAAGAAAAGTATAAGTTCTACTCCTATGGAGATGCGATGCT AATCCTTTAA Protein sequence : MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQTIEHKLFKDVIDYFDENDLFIFNNTKVFPARLFGNKEKTGAKIE VFLLRELDKDTRVWDVLVDPARKIRIGNKLFFDEDESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYI KREVEPEDAERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLSKHKMECEEAFID QKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWTNKFIYPPYDFAVADSMITNFHTPKSTLIMMIAAFA GKDFVMHAYEEAVKEKYKFYSYGDAMLIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 2e-55 | 41 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 1e-55 | 41 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 9e-56 | 41 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 4e-56 | 41 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 3e-56 | 41 |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 1e-58 | 41 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 1e-59 | 41 |
