Gene Information

Name : RIA_1504 (RIA_1504)
Accession : YP_006017938.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1510565 - 1511173 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
ATGTACAAAAACTTTTTTAAAAGAGTTATAGACTTTAGTTTAGCCCTGATAGGCTTTATATTATTACTTCCTGTTTTTTT
AATTGTAATGGTCTTATTGACTATTGCTAACCAAGGGAAGCCTTTCTTTTTTCAGAAAAGACCTGGGAAAAATGAACGTA
TTTTTAGTATCATTAAGTTCAAAACAATGAATGATAAAAAAGATACTAATGGTAATTTATTGTCTGATGCAGAACGTTTA
ACAGCGATAGGTAAACTTGTTAGAAAAACATCATTAGACGAAATTCCTCAACTATTGAATGTAATTAAGGGAGATATGAG
CTTAGTTGGTCCGAGACCTCTGCTGCCACAGTATTTGCCATTATATGATGAAGAGCAGAAAAAGAGACACAATGTACGCC
CTGGTATTACAGGATGGGCACAGATTAATGGAAGAAATGCTATTTCTTGGCAACAAAAATTTGAATATGATGTTTGGTAT
GTTCATAACCTATCACTATTTTTGGATATTAAGGTATTGTTTTTAACAGTAAAAAAAGTTTTTGTTTCAGAAGGGATTTC
TCAGGAAGGACAAGCAACTATGGAACCATTTAAAGGAAATGAAGTATGA

Protein sequence : 
MYKNFFKRVIDFSLALIGFILLLPVFLIVMVLLTIANQGKPFFFQKRPGKNERIFSIIKFKTMNDKKDTNGNLLSDAERL
TAIGKLVRKTSLDEIPQLLNVIKGDMSLVGPRPLLPQYLPLYDEEQKKRHNVRPGITGWAQINGRNAISWQQKFEYDVWY
VHNLSLFLDIKVLFLTVKKVFVSEGISQEGQATMEPFKGNEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RIA_1504 YP_006017938.1 sugar transferase VFG1369 Protein 2e-18 44
RIA_1504 YP_006017938.1 sugar transferase VFG1309 Protein 1e-25 41