Gene Information

Name : RIA_1491 (RIA_1491)
Accession : YP_006017925.1
Strain : Riemerella anatipestifer RA-GD
Genome accession: NC_017569
Putative virulence/resistance : Virulence
Product : Nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1495766 - 1496737 bp
Length : 972 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAATAGAAAAATATTAATTACTGGAGGGGCAGGTTTTATTGGCTCGAACCTTACAGAACACTTTTTGAGTAAAAA
TTATCAAGTAAGAGTTTTAGATAACTTTTCCACAGGTCATAAATACAATATAGAACCTTTTTTTAAGAATGAAAAATTTG
AATTAATTGAAGGAGATATTAGGAACTTAGAGATTTGTAATGAGGCATGTGAAGGAGTAGACTATGTCTTACATCAGGCC
GCTTTAGGTTCTGTTCCTCGCTCTATTGAAAATCCAATTACAAGTAATGAAGTTAATGTTTCGGGATTTCTTAATATGTT
GGTAGCAGCTAGAGATGCTAAAGTTAAACGCTTTGTGTATGCAGCAAGTTCTTCTACTTATGGAGATTCCCAATCGTTAC
CAAAAGTAGAAGAGGTTATTGGAAAGCCACTGTCACCTTATGCGATTACTAAATATGTTAATGAACTCTATGCTGATGTG
TTTAGTCGTACTTATGGTATGGAGTGCATAGGCTTGAGATATTTTAATGTTTTTGGTAGAAGACAAGACCCTAAAGGAGC
CTATGCAGCGGTTATTCCAAAATTTGTGATTCAGTTGATGAATTATCAGTCGCCAACTATCAATGGTGATGGTAGTTACT
CAAGAGATTTCACTTATATTGATAATGTGATTCAGATGAATGAGTTAGCAATGTTAACCGATAATCCGGAAGCTGTAAAT
ACCGTTTATAACACGGCGGTAGGAGATAGGACTACTATTAAACAAATGGCAGAATTGCTGAAAGAATACTTGTCGAAATA
CGATGAGAAAATAGGCGAAGTTGAAATTTTGCACGGTCCCAACAGAATAGGAGATATACCTCATTCTTTAGCCTCCATAG
ACAAAGCAAAGGAACATTTAGGATACGCTCCAACACATGTTTTTGAAGAAGGCTTGAAAGAGGCGGTGGATTGGTATTGG
GAGAATTTGTGA

Protein sequence : 
MSNRKILITGGAGFIGSNLTEHFLSKNYQVRVLDNFSTGHKYNIEPFFKNEKFELIEGDIRNLEICNEACEGVDYVLHQA
ALGSVPRSIENPITSNEVNVSGFLNMLVAARDAKVKRFVYAASSSTYGDSQSLPKVEEVIGKPLSPYAITKYVNELYADV
FSRTYGMECIGLRYFNVFGRRQDPKGAYAAVIPKFVIQLMNYQSPTINGDGSYSRDFTYIDNVIQMNELAMLTDNPEAVN
TVYNTAVGDRTTIKQMAELLKEYLSKYDEKIGEVEILHGPNRIGDIPHSLASIDKAKEHLGYAPTHVFEEGLKEAVDWYW
ENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-75 54
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-75 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RIA_1491 YP_006017925.1 Nucleoside-diphosphate-sugar epimerase VFG0430 Protein 1e-75 54