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Name : cap5D (RIA_1488) Accession : YP_006017922.1 Strain : Riemerella anatipestifer RA-GD Genome accession: NC_017569 Putative virulence/resistance : Unknown Product : Cap5D Function : - COG functional category : - COG ID : - EC number : - Position : 1490576 - 1492501 bp Length : 1926 bp Strand : + Note : - DNA sequence : ATGAACTTTAGTGAACTGAAAAATAAGATCTACGGAGGGGATAATATGATTAGTTTTTCTAATATTAGGTATTTGCCTAG ATGGATGGTACTTCTCATAGATGTTTTGTTTTTGATAGTTTCGCTTATGTTGTCCTATAGGGTGGTGGGTAAACTGTCTT CTGTAAGTTATCCCTATGTACTTAGTATTTACCAGAAGTATGCGGTTGTCGTAGGTGTAAATATCTTTTTTATGTTCTTG TTTCGTACTTACTCGGGGATTATTAGACATTCCACCTTGGTAGATTTATCTAAAATTTTATTAGCTAGTTTTTGCACAGT TTTTACTTTAGGTACAGTTACTTACATATATTTTTTCTTTTTTAAACAGAAATTACTACTGTTTCCCATCCTTCTGATAT ATTTCTGTATTTCTTTTATGGTTCTCTTTGTTTTTAGGTTGGTAGTGAGGGAAATTTTTCAATGGGCAAAAGAATACAGG AGAAGCTACTTAAGAAAAAAAATATTACTATTGGGAATAGGAGAAGAGTCGGTTGCTATTGCAAAAGCGGTGATGGGTAA TCCTTTTTTACCATACGAGGTCGTCGGGTTTATTACTGCTCGAAAGGATTCAAGGAAAGCCAAACTCTTGGGGAAGAGAA TTTATACAAGAGATTTTTTAGAAAAGACTACCAGAGAATATTTAGGTATAGATGGAGTTTTAATTGGTAGTAATACAGTC TCAATAGAGGAGATTGCAGAATGGGTTAATTTGTTTTTAGAGAAAGATTTAAAGGTATTTAAATCTCCGACCGTTCAAAA GTTGAGAAATGATGGGAGTAATATTAAAAATTTTCAAATAGAAGATTTACTTAATAGAAAGCCTATCGTTATAGAAAATG AGGAAGTAAAAAAGAGGCATCATCAAAAATCGGTTTTAGTAACAGGAGGAGCAGGTTCTATAGGGAGTGAAATAGTAAGG CAAGTAGCACAGTTTGAACCTTCGTTAATAGTTGTTCTAGACCAAGCGGAGACTCCTTTACATGAGATACAGTTGGAGGT GGAGGAAAACTACCCTGATATCAAGTTTGAATTTATACTGGCTGATATAACTAATAAGGAACGATTAGAGTCGGTATTTA AAGAATATAATTTTTCTATGGTATATCATGCGGCTGCCTATAAACATGTTCCTTTGATAGAAAATAATCCGCATGAAGCC ACTCTAGTTAATATTCAGGGAAGTAAGAACTTGGCGCTTTTGTCTAGTCATTTTAAAGTTGATAGATTTGTAATGGTCTC CACGGATAAGGCTGTTAACCCTACCAATGTGATGGGAGCCTCTAAAAGAGCTGCAGAGCTTTTTGTGCAAGCTCTTCAAA ATGAGGAAGATAATCAGACTAAATTTATTACCACTAGATTTGGTAATGTTTTAGGTTCTAACGGTTCTGTAATTCCTCAT TTTAGAAAACAAATAGAGAAGGGTGGTCCTGTTACTATTACGCATCCTGAAATTACGAGGTATTTTATGACTATTCCAGA GGCTTGTGATCTTGTGTTACAAGCAGGGATTATGGGAAAAGGAGGAGAAATATTTGTATTTGATATGGGAGAACCTGTAA AAATACTTAATTTGGCAAGAAGAATGATTAAATTGTCTGGTCTAGAGCCAGATGTAGATATAAAAATTGTTTATACAGGG CTAAGACCAGGGGAAAAACTATATGAAGAACTTTTGAGTAATGATACAAAAACTCTTCCTACACATCACGAGAAAATCAT GATTTCTAAGGACCCCGTTATGTTGTATGAGGAAATAGATGAATTAACATCTAGAATATATGAGAAAGCTAAAGCTAAAG ATAAAGTAGAGGTGGTTAGAATTTTGAAGGAGATAGTTAAAGAGTTTAGAAGTAATAATTCTGTGTTTGAGTCTTTAGAT AAGTAG Protein sequence : MNFSELKNKIYGGDNMISFSNIRYLPRWMVLLIDVLFLIVSLMLSYRVVGKLSSVSYPYVLSIYQKYAVVVGVNIFFMFL FRTYSGIIRHSTLVDLSKILLASFCTVFTLGTVTYIYFFFFKQKLLLFPILLIYFCISFMVLFVFRLVVREIFQWAKEYR RSYLRKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITARKDSRKAKLLGKRIYTRDFLEKTTREYLGIDGVLIGSNTV SIEEIAEWVNLFLEKDLKVFKSPTVQKLRNDGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIGSEIVR QVAQFEPSLIVVLDQAETPLHEIQLEVEENYPDIKFEFILADITNKERLESVFKEYNFSMVYHAAAYKHVPLIENNPHEA TLVNIQGSKNLALLSSHFKVDRFVMVSTDKAVNPTNVMGASKRAAELFVQALQNEEDNQTKFITTRFGNVLGSNGSVIPH FRKQIEKGGPVTITHPEITRYFMTIPEACDLVLQAGIMGKGGEIFVFDMGEPVKILNLARRMIKLSGLEPDVDIKIVYTG LRPGEKLYEELLSNDTKTLPTHHEKIMISKDPVMLYEEIDELTSRIYEKAKAKDKVEVVRILKEIVKEFRSNNSVFESLD K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-75 | 42 |
