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Name : RIA_1276 (RIA_1276) Accession : YP_006017724.1 Strain : Riemerella anatipestifer RA-GD Genome accession: NC_017569 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1266138 - 1267406 bp Length : 1269 bp Strand : + Note : - DNA sequence : ATGTTACAAGTTCAATTTTTAAGAGAGCAAAAAAGCCGTGTTTTAGAAGGGCTTAAAAAGAGAAATTTTAAGGAGCTAAA CCTTGTAGATGAGGCAATAGCGACTGATGACGAAAGAAAGAAAATACAGTATGAGTTAGATGAAAATCTAGCTCAAATGA ATAAAATATCCAAAGAGATAGGGCTTCTAATGAAGGAAGGAAAGAAGCAAGAAGCAGAGGAGGCTAAAACTAAAACAGGA GAGTTTAAGCAGAAATCACAGGATTTACAACAGTTGTTAAAAGAAAAAGAGGAGTCTCTACTGAATATTCTTTATCAAAT CCCAAATATACCAGCAGATATTGTAAAAGCGGGTAGTTCGGCAGATGATAATGAGGTGGTGTATCAGTCTTGTGATACTT TTGAGATGGGAACAGAGGCTTTGCCACACTGGGAACTTGCTAAAAAATACAATCTAATTGATTTTGAATTGGGTGTAAAG ATAGCAGGGGCAGGTTTTCCAGTTTATTTAGGTAAAGGAGCTAGGCTACAAAGAGCATTAGTGCAGTTTTTTCTTGATAA AAATACCGATGCAGGTTACTTAGAAGTAAATCCGCCGCATGTAGTAAATGAAGCCTCTGGTTATGGTACGGGGCAACTTC CTGATAAAGAGGGACAAATGTATTTTGTGAATGAGGATAATTTATATCTTATTCCTACAGCAGAAGTGCCTGTAACCAAT ATTTATAGAGATGTAATCTTGGAGGAAAAAAAACTTCCTGTAAAGAATACGGCTTTTTCTCAATGTTACAGAAGAGAAGC AGGAAGCTACGGTGCTGATGTGAGAGGACTTAACCGTCTTCATCAATTTGAAAAAGTAGAGATTGTAAGACTAGAAAAAC CTGAAAACTCTTACACTGCACTAGATGAGATGGTGGCTCATGTAAAATCTATTTTAGAGGATTTGGAATTGCCATTTAGA ATTTTGCGTTTATGTGGTGGTGATATGGGCTTTACTTCTGCACTTACTTACGATTTTGAGGTGTGGAGTGCGGCTCAACA GAGATGGTTGGAGGTATCTTCGGTGTCTAACTTTGAAAGTTTTCAAGCTAATAGATTAAAATGCAGATATAAATCAGGAG ATGATAAACCTCAGTTAGTACATACATTAAATGGTTCTGCGATGGCCTTACCTAGAGTAATGGCAGCACTTTTAGAGAAC AACCAAACGGAAGAAGGTGTTAAAATTCCAGAAAAGCTAAGAGCATATACAAGATTTGAGAGTATATAA Protein sequence : MLQVQFLREQKSRVLEGLKKRNFKELNLVDEAIATDDERKKIQYELDENLAQMNKISKEIGLLMKEGKKQEAEEAKTKTG EFKQKSQDLQQLLKEKEESLLNILYQIPNIPADIVKAGSSADDNEVVYQSCDTFEMGTEALPHWELAKKYNLIDFELGVK IAGAGFPVYLGKGARLQRALVQFFLDKNTDAGYLEVNPPHVVNEASGYGTGQLPDKEGQMYFVNEDNLYLIPTAEVPVTN IYRDVILEEKKLPVKNTAFSQCYRREAGSYGADVRGLNRLHQFEKVEIVRLEKPENSYTALDEMVAHVKSILEDLELPFR ILRLCGGDMGFTSALTYDFEVWSAAQQRWLEVSSVSNFESFQANRLKCRYKSGDDKPQLVHTLNGSAMALPRVMAALLEN NQTEEGVKIPEKLRAYTRFESI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-63 | 50 |
