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Name : lukS-I (SPSE_0991) Accession : YP_006015105.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : synergohymenotropic toxin Function : - COG functional category : - COG ID : - EC number : - Position : 1018658 - 1019590 bp Length : 933 bp Strand : - Note : identified by match to protein family HMM PF07968, match to protein family HMM TIGR01002 DNA sequence : ATGGTAAAAAATAAATTATTAGCCGCAACACTATCTATAAGTTTAGTTCTTCCACTTATTACCCCATACAGTGAAGAAGC CAAAGCTGCAAACACTATAGAAGAAATCGGCGAAGGAGCACAAATTATTAAAAGAACTGAGGATGTAAGCAGCAGAAAAT GGGGCGTTACTCAAAACATTCAGTTTGACTTTGTTAAAGACCCTAAATACAACAAAGATGCATTAATTATTAAAATGCAA GGTTTTATCAAATCTAGAACAAGTTTTACTGATGTTAAAGGGAAAGGATATGAATCAACAAAAAGAATGCTTTGGCCTTT TCAATATAATATTGCTCTAAAAACAAATGATCCTAATGTCTCTTTAATTAATTATCTCCCTAAAAATAAAATTGAATCAA TAGATGTGAGCCAAACATTAGGTTACAATGTTGGCGGTAACTTCCAAAGTGCACCATTACTTGGGGGTAAAGGCGCATTT AATTATTCAAAGAAAATTAGCTATACTCAAAAGAATTATATTAGTGAAGTCGCACAACAAAATTCAAAAAATATCAGATG GGAAGTCAAAGCAAATTCATTTAATACAGAAAATGGACAAGTATCAGCATATGACAGACACTTATTTGTACGAAGTCCTA TCGGGCCAAATGCAAGAGACTTTTTTGTGCCAAATGATGAGTTACCTCCTTTAATTCAAAGTGGTTTTAATCCATCGTTT ATTGCAACTGTATCTCATGAAAAAGATAAAGGTGATACAAGTGAATTCGAAATTGCTTATGGTAGAAATCTAGACATTAC GTATGCAACTTTCTTCCCAAGAACTGGCATATTTGCTGAAAGACGTCATAATGCTTTAATGAATCGAAATCTTGTCACTA AATATGAAGTGAACTGGAAAACACACGAAATTAAAGTAAAGGGGCATAATTAA Protein sequence : MVKNKLLAATLSISLVLPLITPYSEEAKAANTIEEIGEGAQIIKRTEDVSSRKWGVTQNIQFDFVKDPKYNKDALIIKMQ GFIKSRTSFTDVKGKGYESTKRMLWPFQYNIALKTNDPNVSLINYLPKNKIESIDVSQTLGYNVGGNFQSAPLLGGKGAF NYSKKISYTQKNYISEVAQQNSKNIRWEVKANSFNTENGQVSAYDRHLFVRSPIGPNARDFFVPNDELPPLIQSGFNPSF IATVSHEKDKGDTSEFEIAYGRNLDITYATFFPRTGIFAERRHNALMNRNLVTKYEVNWKTHEIKVKGHN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 2e-113 | 74 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 2e-104 | 69 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 7e-95 | 66 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 7e-95 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lukS-I | YP_006015105.1 | synergohymenotropic toxin | VFG1274 | Protein | 3e-90 | 68 |
| lukS-I | YP_006015105.1 | synergohymenotropic toxin | VFG1277 | Protein | 3e-95 | 66 |
| lukS-I | YP_006015105.1 | synergohymenotropic toxin | VFG1273 | Protein | 1e-103 | 66 |
