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Name : lukF-I (SPSE_0990) Accession : YP_006015104.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : synergohymenotropic toxin Function : - COG functional category : - COG ID : - EC number : - Position : 1017676 - 1018656 bp Length : 981 bp Strand : - Note : identified by match to protein family HMM PF07968, match to protein family HMM TIGR01002 DNA sequence : ATGAAAATAAGCAAAGTTATCAAAGCTGCTACTGCAACATCCGTGGCATTGATGTTATTTTCTAATCCTGTCTATGCCGC TAATCAAATTACACCTGTATCTGAAAAAAAAGTAGACGATAAAATCACTTTATATAAGACTACCGCTACTGCAGATTCAG ATAAGTTAAATATTTCTCAACTCTTAACTTTTAATTTTATTAAGGATAAGAGCTATGATAAGGATACCTTAGTACTTAAA GCTGCAGGTAATATTAACTCAGGTTATAAAAGCCCTAACCCTAACGACTATATCTATTCAAGTTTTTATTGGGGGGCTAA GTATAATGTGTCAATCAGTGCAGAATCAAAAGGTGCTGTTAACGTAGTTGATTATGCACCAAAAAATCAAAATGAAGAGT TTCAAGTTCAAAACACTCTAGGCTACTCTTTTGGAGGAGACATTAGTATCTCCAAAGGTTTGTCAGGCGGTTTGAACGGC TCAGAATCATTTTCAGAAACAATAAACTATAAACAGGAAAGTTATAGAACAACTATCGATAAACACACAGATAATAAAAC TATTGGCTGGGGCGTTGAAGCACATAAAATCATGAATGCTGGTTGGGGCCCATATGGTCGAGATAGCTTCCATGACCTAT ATGGAAATGAATTGTTTTTAGGTGGTAGACAAAGTAAATTAAATGCTGGACAAAACTTCTTACCTACGAGTCAAATGCCA CTTTTAGCAAGAGGTAACTTTAATCCTGAATTTTTAAGTGTATTATCACATAAACCAAATGGCGCTAAAACATCAAAAAT TAAAGTCACGTATCAAAGAGAAATGGATGAGTATACAAATTATTGGAATGGCTTTCATTGGATGGGTACAAACTATAAAA ATCAAAACAATGCCACATTTACATCATTTTATGAAATTGATTGGGATCAGCATACAGTAAAACTAATCAAAACACATTCT GATGAAAAAAACCCATCATAA Protein sequence : MKISKVIKAATATSVALMLFSNPVYAANQITPVSEKKVDDKITLYKTTATADSDKLNISQLLTFNFIKDKSYDKDTLVLK AAGNINSGYKSPNPNDYIYSSFYWGAKYNVSISAESKGAVNVVDYAPKNQNEEFQVQNTLGYSFGGDISISKGLSGGLNG SESFSETINYKQESYRTTIDKHTDNKTIGWGVEAHKIMNAGWGPYGRDSFHDLYGNELFLGGRQSKLNAGQNFLPTSQMP LLARGNFNPEFLSVLSHKPNGAKTSKIKVTYQREMDEYTNYWNGFHWMGTNYKNQNNATFTSFYEIDWDQHTVKLIKTHS DEKNPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 3e-122 | 80 |
| SAOV_1908 | YP_005737353.1 | Panton-Valentine leukocidin LukF-PV chain precursor | Virulence | ¥ÕSa3 | Protein | 5e-114 | 75 |
| lukF | NP_646195.1 | Panton-Valentine leukocidin chain F precursor | Virulence | ¥ÕSa2 | Protein | 7e-108 | 74 |
| lukF-PV | YP_494078.1 | Panton-Valentine leukocidin, LukF-PV | Virulence | ¥ÕSa2 | Protein | 7e-108 | 74 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lukF-I | YP_006015104.1 | synergohymenotropic toxin | VFG1276 | Protein | 3e-108 | 74 |
| lukF-I | YP_006015104.1 | synergohymenotropic toxin | VFG1275 | Protein | 4e-111 | 73 |
