|
Name : SPSE_0806 (SPSE_0806) Accession : YP_006014960.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : transposase for ISSps1 Function : - COG functional category : - COG ID : - EC number : - Position : 863032 - 864351 bp Length : 1320 bp Strand : - Note : identified by match to protein family HMM PF01610 DNA sequence : ATGTGTAATGATATATCAGAAATACTAGGAATTAAAGTTAAAAATTTAAAAATCACTCAAAATTTAGGATTACATGTTCA TAAAAACGTACAGGCATTATTCTATGAAGGTCAATTGACTTATCATCCCAGTGCTTGTGAGTGTTGTGGAATTAAAAATG ATAACCATTTAATTATTAAACATGGCTTTCGTAAAACGAATGTTTATATGGGGTTAATTTTTGAAAGACCTGCCTATTTA AAATTGAAGAAACAGCGTTTTTACTGTAAAGCTTGCCAACGAACCTTTACAGCTGAAACGCCCTATATTCAACCCCGATG TACCATCTCAAATGAGGTCAAACGCATGATGACCTGGAAACTATCAAAAGTTACATCTGAAAAAGATATCGCTGAAAGTC TATGTGTATCGCCTTCAACTGTCCATCGCCATTTAAAAGTAGTAAGTAATTCGGTGAAGACACACGCACATTACGTTTTA CCTGAGCACTTAGCTTTTGACGAATTCAAGTCGACGAAAGATGTCGAAGGTGCAATGAGCTTTATTTACTGTGATAGTGT GACTCATGATATCATTGATATTTTACCTGATCGTCGCAAACATCAATTAGAAGCTTATTTTTTAAAGTTCTCTAGAAAAC AACGTGAAAAAGTAAAAACGGTCTCTATAGATATGTTTCCACCTTATATCGCTCTGATTCAGGATTTATTTCCTCATGCG GAAATCATTATCGATCGCTTTCATATCGTACAAGCCATCAATCGTGAAATCAATCGCTGCCGTGTTCAAGTCATGAATGG TTTTAGGACAAAAGAGCGACCTCAATATAATAAATTAAAGCGTTATTGGAAGTTACTATTAAAAGCGCCCATTGATTTAG ATCGAATGATATATCAGCCATACAGACTTTTTAAGTCATGGCAGAGCCAGTACAGTTTAGTTCAATACCTGTTAAATCTT GATGAGACGCTCAAAGAGACATATGAAACAGGACACCGTCTTTTAAGTGCTTTGAAAGCAAACGATATCCAGCAACTACG GTTCATCTTACAGGATGCAAAGACAAAAGATACTTCGAAAGGGCTCAAGCGTGTCATCCACACATTCATCAAATACATGC CTTATATCTCAAGTACTATGGGTCATCGACATTTAACGAATGGACCCATTGAAGGGATTAATAATAAAATAAAACTGATT AAACGTGTTTCTTATGGTTATAGAAATTTCTGGAATTTTAGGAATCGTATCTTAATGATTTCTAAGGTATTTGTAAGTGA ATATAAAAAACGCATTAAACAACAAAATAACGATGCTTAA Protein sequence : MCNDISEILGIKVKNLKITQNLGLHVHKNVQALFYEGQLTYHPSACECCGIKNDNHLIIKHGFRKTNVYMGLIFERPAYL KLKKQRFYCKACQRTFTAETPYIQPRCTISNEVKRMMTWKLSKVTSEKDIAESLCVSPSTVHRHLKVVSNSVKTHAHYVL PEHLAFDEFKSTKDVEGAMSFIYCDSVTHDIIDILPDRRKHQLEAYFLKFSRKQREKVKTVSIDMFPPYIALIQDLFPHA EIIIDRFHIVQAINREINRCRVQVMNGFRTKERPQYNKLKRYWKLLLKAPIDLDRMIYQPYRLFKSWQSQYSLVQYLLNL DETLKETYETGHRLLSALKANDIQQLRFILQDAKTKDTSKGLKRVIHTFIKYMPYISSTMGHRHLTNGPIEGINNKIKLI KRVSYGYRNFWNFRNRILMISKVFVSEYKKRIKQQNNDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_251945.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 1e-91 | 47 |
| tnp | YP_251995.1 | transposase for ISSha1 | Not tested | SCCmec | Protein | 9e-92 | 47 |
| SA1006 | NP_374278.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 1e-76 | 44 |
| SACOL1879 | YP_186706.1 | IS1181 transposase | Not tested | vSa¥â | Protein | 2e-76 | 44 |
| tnp | NP_371686.1 | IS1181 transposase | Not tested | vSa¥ã | Protein | 1e-76 | 44 |
