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Name : SPSE_0760 (SPSE_0760) Accession : YP_006014919.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : S1 RNA binding domain-containing protein Function : - COG functional category : - COG ID : - EC number : - Position : 812664 - 814814 bp Length : 2151 bp Strand : + Note : identified by match to protein family HMM PF00575, match to protein family HMM PF09371 DNA sequence : TTGACAAATCATTTTGTACAAGCAATACATAACCAATATCAATATCCAGTTAAACAAATTGAAGCGGTTCTGAAATTATT AGAAGAAAAAAATACTGTGCCTTTTATTGCACGTTACCGTAAAGAAGTGACGGGCGGTTTAGATGAAGTCGAAATCAAAC AAATTGCTGATGAATATCACTATATGGAACAGTTGCAAAAGCGAAAAGATGAAGTGATACATAGTATTGAGCAACAGGGC TTGCTAACGGATGAGCTTCGACGTGACATTCAACAGCAAACAAAATTGCAACGTGTGGAAGATTTGTATCGTCCCTATAA GCAAAAGAAAAAGACCCGTGCAACAGAGGCGAAACGTAAAGGCATCGAACCTTTAGCAGAATGGATTTATAGACAAAAGT TAGACGCTGACTTAGGAGAGAAAGCGCAGACGTTTTTAACTGATGAAGTAACCTCAGTGGAAGAAGCGATTCAAGGTGCG CAGGATATCATTGCTGAAAAAATTGCAGATCATCCACAATACCGCAAGCAAATTTTAAAGTTGACGCAAAAAGAAGGGCT CATGACAGCGCTGAAAAAGAAAAAGGCTGAGGATGAAAAAGCCGTGTTTGAAATGTATTATGATTATCAAGAACCTCTCC GTCAAGTTGCGAATCATCGTATTTTAGCGATGAATCGTGGTGAAAATGAAAAAATATTGCAAGTCAAAATTGAAATGGAC AAAGCGATTTTGGCACAAAATATTAAAAAACAAGAAGTCAAAGGCCACAACGAATTATCAACAATTGTGGGCGAAGCGAT TGATGACGCGATGAAACGTTTAATCTTTCCTTCCATTGAACGTGAAATAAGAACCGATTTAACAGAGCGCGCAGAAGCAC AAGCGATTACATTGTTTAGTGAAAACTTGAAAAATCTGTTGTTACAACCACCATTAAAAGGGAAGCAAATTTTAGGCGTC GATCCAGCTTTTCGAACTGGCTGTAAACTCGCAGTCATTAATCCGTATGGGACATTTATCGAAAAATCCGTCATGTACCC ACATCCACCTGTATCTAAAGTGGCTGAAGCTGAAAAAGTCTTCTTAAAAATGGTGAAAGACTTCGATATTAATTTAATTG CGATAGGAAATGGAACAGCGAGTCGTGAAACGGAACAGTTTGTCGCACGTATGATTCAAGACCATGCACTCGATGTCCAG TATATTATTGTGAACGAGGCAGGGGCATCCGTGTACTCGGCGTCTGAGATTGCGCGTACTGAATTCCCTGATTTTCAAGT GGAAGAGCGTAGTGCCGTATCGATTGGTAGACGTGTACAAGATCCTTTAAGTGAACTCGTTAAAATTGATCCTAAGTCGA TCGGTGTCGGACAATATCAACACGACGTGAACCAAAAGGCGCTAGATGCTGCACTTGACTTTGTAGTTGAAACTGCTGTT AACCAAGTCGGTGTGGATGTCAATACGGCTTCAAGTACATTGCTTCAGCATGTGTCAGGGTTATCACGACAAATTGCTGA TAACATTGTGTTGTATCGTGAAGAAAACGGGGCCATTACTCATCATCGTCAACTGAATAAGGTTAAACGATTAGGTGCGA AAACGTTCGAACAAAGTATCGGATTTTTACGTATTGTGAATGGTAAAGAACCGTTAGACAATACAGCAATTCATCCAGAA AGTTATGATGCGACTTATCAATTATTAGAAAGTTTAGAACTCAAAATTACAGATATTGGCACATCTGAATTAGCAAAGGT TTTATCAACATTGAATATAGCAAGTTATGCGACGAAGTTAAACATCGGTGTCCCTACGTTAGAAGACATCGTGAAGTCAT TAATCGCACCAAACCGAGATCCTCGTGATGATTATGAAACACCTGAATTAAAGTCAGATGTATTGTCGATAGAGGATTTA TCAAAAGGTATGAAATTGAATGGAACAGTGCGAAATGTTGTTGATTTCGGTGCTTTTGTCGACATCGGCATTAAGCAAGA CGGTTTAGTACACATTTCAAAACTTGCTAAAAAGTTTATCAAACACCCGATGGACATTGTCAGCGTTGGAGACATTGTAG AAGTGTGGATTGAAAATATTGATGAAAATAAAGGGAAAGTTGCTCTGACAATGATTGATCCAAATGAATAA Protein sequence : MTNHFVQAIHNQYQYPVKQIEAVLKLLEEKNTVPFIARYRKEVTGGLDEVEIKQIADEYHYMEQLQKRKDEVIHSIEQQG LLTDELRRDIQQQTKLQRVEDLYRPYKQKKKTRATEAKRKGIEPLAEWIYRQKLDADLGEKAQTFLTDEVTSVEEAIQGA QDIIAEKIADHPQYRKQILKLTQKEGLMTALKKKKAEDEKAVFEMYYDYQEPLRQVANHRILAMNRGENEKILQVKIEMD KAILAQNIKKQEVKGHNELSTIVGEAIDDAMKRLIFPSIEREIRTDLTERAEAQAITLFSENLKNLLLQPPLKGKQILGV DPAFRTGCKLAVINPYGTFIEKSVMYPHPPVSKVAEAEKVFLKMVKDFDINLIAIGNGTASRETEQFVARMIQDHALDVQ YIIVNEAGASVYSASEIARTEFPDFQVEERSAVSIGRRVQDPLSELVKIDPKSIGVGQYQHDVNQKALDAALDFVVETAV NQVGVDVNTASSTLLQHVSGLSRQIADNIVLYREENGAITHHRQLNKVKRLGAKTFEQSIGFLRIVNGKEPLDNTAIHPE SYDATYQLLESLELKITDIGTSELAKVLSTLNIASYATKLNIGVPTLEDIVKSLIAPNRDPRDDYETPELKSDVLSIEDL SKGMKLNGTVRNVVDFGAFVDIGIKQDGLVHISKLAKKFIKHPMDIVSVGDIVEVWIENIDENKGKVALTMIDPNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-120 | 42 |
