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Name : pdp (SPSE_0681) Accession : YP_006014842.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : - COG ID : - EC number : 2.4.2.2 Position : 743226 - 744527 bp Length : 1302 bp Strand : + Note : identified by match to protein family HMM PF00591, match to protein family HMM PF02885, match to protein family HMM PF07831, match to protein family HMM TIGR02644 DNA sequence : ATGAGAATGGTGGATATTATTGCTAAAAAAAGGGATGGGCATGCTTTAACGAAAGAAGAAATTGAATTTGTTGTCAATGG TTATACAAATGATGACATTCCTGATTATCAAATGTCTAGTTTAGCAATGGCAATTTTTTTCCAAGATATGACTGATGAAG AACGTGCATACTTAACAATGGCAATGGTGGAATCAGGTGACCAAATCGACCTTTCTAACATTGAAGGGATTAAAGTCGAC AAGCACTCAACTGGTGGTGTAGGTGACACAACGACACTTGTTCTTGCGCCATTAGTTGCAGCATTAGATGTCCCTGTTGC GAAAATGAGTGGTCGTGGTTTAGGCCATACTGGTGGAACGATAGATAAATTAGAATCAGTAGAAGGCTTCCATGTTGAAA TTTCAGAAGAAGCGTTCGTGAAGCTAGTGAATGAAGATAAAGTGGCGGTTATCGGTCAAACAGGTAATTTAACGCCTGCA GACAAAAAGATTTATGCGCTTCGTGATGTCACTGCGACAGTAAACTCTATTCCATTAATTGCGTCATCGATTATGAGTAA AAAAATTGCTGCCGGCGCTGATGCGATCGTATTAGACGTTAAAACAGGTAACGGCGCATTTATGAAAACAGTTGAAGATG CTGAGCAATTGGCACATGCAATGGTTAAAATTGGTAACCAAGTTGGACGTCAAACGATGGCGATTATTTCTGATATGAGT CAGCCACTCGGTCGTGCGATTGGTAATGCGCTTGAATTACAAGAAGCGATCGATACATTGAAAGGTGAAGGTCCTGAAGA TTTAACAGAACTTGTATTAACTTTAGGTTCTCAAATGGTCGTACTTGCTCAAAAAGCGAAAGATTTAGATGAAGCACGTG GTATGTTACAAGAAGTGATTGATAACGGTAAGGCGCTTGAAAAATTCAAAACGTTTTTAAGCAACCAAGGTGGAGACGCA TCTGTTGTCGATGAGCCATCAAAATTACCTACAGCACAATATCAATTCGAATTACCAGCAAAACGAAGCGGTGTTGTTTC AGAAATGATTGCCAATGAAATCGGTATTGCTTCCATGATGTTAGGTGCAGGTCGTCAAACAAAAGAAGATGTCATTGACT TAGCAGTAGGTCTTGTATTGAATAAAAAAGTCGGTGATCGTGTTGAAGAAGGCGAATCATTATTGACAATTTATGCGAAT AGTGAAGATGTAGAACAAGTCAAACAAAAATTGTATGATAACATTACGATTTCAGACCACGCAGAACAGCCACAGCTTAT TCATACAATCATTACTGAATAA Protein sequence : MRMVDIIAKKRDGHALTKEEIEFVVNGYTNDDIPDYQMSSLAMAIFFQDMTDEERAYLTMAMVESGDQIDLSNIEGIKVD KHSTGGVGDTTTLVLAPLVAALDVPVAKMSGRGLGHTGGTIDKLESVEGFHVEISEEAFVKLVNEDKVAVIGQTGNLTPA DKKIYALRDVTATVNSIPLIASSIMSKKIAAGADAIVLDVKTGNGAFMKTVEDAEQLAHAMVKIGNQVGRQTMAIISDMS QPLGRAIGNALELQEAIDTLKGEGPEDLTELVLTLGSQMVVLAQKAKDLDEARGMLQEVIDNGKALEKFKTFLSNQGGDA SVVDEPSKLPTAQYQFELPAKRSGVVSEMIANEIGIASMMLGAGRQTKEDVIDLAVGLVLNKKVGDRVEEGESLLTIYAN SEDVEQVKQKLYDNITISDHAEQPQLIHTIITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 6e-74 | 44 |
