Gene Information

Name : SPSE_0638 (SPSE_0638)
Accession : YP_006014809.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 699729 - 700691 bp
Length : 963 bp
Strand : +
Note : identified by match to protein family HMM PF01032

DNA sequence : 
ATGAATATTCATTTTGGTAGACGCTATAGTTTAATCATCGGACTTCTTATTGTGGGCGCCATCCTAAGTTTAAGTGCAGG
TGCGGTTTGGATTTCACCGATTGCGGTAATAAAAGAAGTATGGTCAGGTGACAACTTTATATTAAGTGAATTTAGAGTAC
CCCGTATGTTACTCGGTATATTAGTCGGAGCGGCATTAGCGATTTCGGGTGCAGTCATTCAAGGTGTCATTCGAAATCCT
CTTGCGTCACCGGATGTTATTGGGATTACGAAAGGGGCAAGTTTAGCGGCGGTTATTGTCATTATTGTGTTCCCGACTGC
GCCTTTATTTGTGCTTCCAGTTGCTTCATTTATTGGGGCATTAGTCATCAGTCTCATTTTATCCCTGTTGATTAGTTGGC
AGGGGATTAAAGGTTCACAACTGGCGCTGATCGGGATGGCAATTGGTGCTGTTGCGATGGCGTTAGTACAATACTTACTC
ATCCGTAACCCTATGGAAGCCAACATTGCACTTGTATGGTTAACCGGCAGTCTTTTCGGTCGTTCGATGGACCATGTGTT
GACTATTTTACCTTGGCTGATTGTAGCGATTCCTGTCATTTTCTTATATGCGAGAAAGCTCGATATTTTACATTTAGGAG
AAGAAGTTGCGACGGCGTTGGGTACGCATGTACAACGCACGAAAATGATTTTACTCTTCACATCCGTGATGTTGGCAGGT
GCAGCAATTTCTGTAGTTGGTGGATTAAGCTTTTTAGGACTCATTGCGCCACACATTGCAAGAAGTCTTGTCGGTCACCA
ACACCGTCATATCGTTGCGATGTCAGGATTAGTAGGTGCATTATTAATGGTTATTGCGGATGGTTTGGCACGTATCATTG
CACCGCCTATTGATATACCAGTCGGCGTGTTGATTGCGATTATTGGTGCACCATATTTCCTTTATGTGTTACGAAAAATG
TAA

Protein sequence : 
MNIHFGRRYSLIIGLLIVGAILSLSAGAVWISPIAVIKEVWSGDNFILSEFRVPRMLLGILVGAALAISGAVIQGVIRNP
LASPDVIGITKGASLAAVIVIIVFPTAPLFVLPVASFIGALVISLILSLLISWQGIKGSQLALIGMAIGAVAMALVQYLL
IRNPMEANIALVWLTGSLFGRSMDHVLTILPWLIVAIPVIFLYARKLDILHLGEEVATALGTHVQRTKMILLFTSVMLAG
AAISVVGGLSFLGLIAPHIARSLVGHQHRHIVAMSGLVGALLMVIADGLARIIAPPIDIPVGVLIAIIGAPYFLYVLRKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-39 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSE_0638 YP_006014809.1 iron compound ABC transporter permease BAC0163 Protein 5e-40 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSE_0638 YP_006014809.1 iron compound ABC transporter permease VFG1043 Protein 7e-40 44