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Name : SPSE_0056 (SPSE_0056) Accession : YP_006014244.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 64863 - 66029 bp Length : 1167 bp Strand : + Note : identified by match to protein family HMM PF01546, match to protein family HMM PF07687, match to protein family HMM TIGR01910 DNA sequence : ATGTCAGTTTTAAGTTCAGATGAAAAAATTCAAATTTTACGTGACATCATCGAAATCCAGTCAGTTAACGATTATGAGGT TGAAGTGGCTCAGTATTTAAAAAATTTGTTTGATAAATATCAAATTAATGCTCAAATTTTAAAACTAGAAAATAGTGAGA CACGTGCGAACTTAGTAGCAGAAATTGGCTCAGGGCACCCCGTTCTTGGTGTTTCAGGTCATATGGATGTAGTGAATGTA GGAGATATAACAACATGGCAATATGAACCATTTCAGCTAACGGAGGATGAAGATGGCCGATTACATGGTCGTGGCACAGC GGATATGAAAGCAGGTCTCGCAGCACTCGTAATAAGTATGATTGAAATTAAAGAAGCGGGATTATTGAAGAAAGGGACGA TTCGTCTATTAGCAACGGCTGGTGAAGAAATTGCCAGTGAAGGGGCAGCGCAATTAAGAGAACAAGGTTATACTGATGAT TTGGATGCTTTATTGATTGCAGAACCTTCACAAAATGGTATGTTTTACGCACATAAAGGGTCTATGCATTTCGAATTAAC ATCCAGAGGTAAATCTGCGCACAGCTCTATGCCAGAGTTAGGGATCAATGCCATTACACCTGTTGTAAACTTTATTTATC ATTTGAATGAGGCGTTTCAACACGTCCATGAACGTAATCATATCATAGGACCGCCAACAATGGCCTCTACGGTTATCCAA GGTGGGGATCAGGTGAACTCTATTCCAGACAAAGCAACAGCCTTATTCAATGTACGGACAGTGACAGAATACAATAGTCA AAGTTTTATGGCGTTATTTCAATCGATTCAAGAACGTGTAAGCGATGATCACCATCGTCTCACACTCCAAGCATATGGGG ACCGCTCACCTGTTGTCACTACAGGAGAAAATCGTCTGGTTAACCTTGCGCAAGATATCAGCGAAAAATACTTTGGCGAA AAAGTTAAAAAGATTGCTTCAACGGGGGTTACGGACGCATCGCTTTTATTAAAAGATAAAGATATTCATTTTCCATTTAT AACCTTTGGACCTGGTGAAACATCACAAGCCCATCAAGTTGATGAATATGTCCAAAAAGACGTTTATTTAACTTTTATTC AGTTATATCAGGAAATGTTTACAACTTATTTGAATGATGAAAAATAA Protein sequence : MSVLSSDEKIQILRDIIEIQSVNDYEVEVAQYLKNLFDKYQINAQILKLENSETRANLVAEIGSGHPVLGVSGHMDVVNV GDITTWQYEPFQLTEDEDGRLHGRGTADMKAGLAALVISMIEIKEAGLLKKGTIRLLATAGEEIASEGAAQLREQGYTDD LDALLIAEPSQNGMFYAHKGSMHFELTSRGKSAHSSMPELGINAITPVVNFIYHLNEAFQHVHERNHIIGPPTMASTVIQ GGDQVNSIPDKATALFNVRTVTEYNSQSFMALFQSIQERVSDDHHRLTLQAYGDRSPVVTTGENRLVNLAQDISEKYFGE KVKKIASTGVTDASLLLKDKDIHFPFITFGPGETSQAHQVDEYVQKDVYLTFIQLYQEMFTTYLNDEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 9e-65 | 42 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-65 | 42 |
