|
Name : ureC (SPSE_0303) Accession : YP_006014486.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : - COG ID : - EC number : 3.5.1.5 Position : 361340 - 363055 bp Length : 1716 bp Strand : + Note : identified by match to protein family HMM PF00449, match to protein family HMM PF01979, match to protein family HMM TIGR01792 DNA sequence : ATGAGTTTTAAAATGACAGAATCACAGTATACTAGTTTGTACGGCCCAACAGTCGGCGATTCTATTCGTTTAGCTGACAC GGATTTATTTGCGAAAGTCGAAAAAGATTACGCAAGATATGGTGATGAGGTTACTTTCGGTGGTGGTAAATCAATCCGTG ATGGTATGGGACAAAATCCGAATGCAACACGTGATAACAAAGCCGTGGCAGACCTAGTTATTTCAAATGCTGTCGTGATT GATCACGATAAAGTCATTAAATGTGATATCGGTGTGAAAAATGGTTACATCATGAAATTAGGGAAAGCCGGCAACCCGGA TATTATGGATGGTGTCGATATTATTATTGGTTCCTCGACAGATGTGATTGCAGCAGAGGGGATGATTGTTACTGCGGGCG GTATTGATACACATGTACACTTTATTAACCCTGAACAAGCTGAAGTTGCATTAGAAAGTGGCATTACAACACATATCGGC GGGGGAACTGGTGCTTCAGAAGGCTCAAAAGCAACAACGGTGACACCAGGTTCTTGGTATATTCACCGCATGCTTCAAGC TGCAGAAAATTTGCCGCTTAACATTGGTTTTACAGGTAAAGGTCAAGCGGTGAACCCGACTGCATTAGTAGAACAAATTC ATGCAGGGGTCATCGGTTTGAAAGTGCACGAAGATTGGGGTGCGACGCCTTCAGCATTACGTCATGCACTTGAAGTGGCA GATGACTATGATATTCAAATCGCACTGCACGCGGATACTTTGAACGAAGCGGGCTTTATGGAAGATACGATGAAAGCGAT TGGTGATAAAGTGATCCATATGTACCATACAGAAGGGGCTGGTGGTGGACACGCACCTGACTTAATTAAATCAGCGGGTT ATCCGAATGTGCTACCATCATCGACGAACCCAACATTGCCGTATACACATAATACGATTGATGAACATCTAGACATGGTC ATGATTACACACCATTTAAATGCATCGATTCCAGAAGACGTGGCTTTCGCGGATTCTCGTATTCGTAAAGAAACAATTGC TGCAGAAGACGTTTTACAAGATATGGGTGTCTTTAGTATGATCAGCTCTGACTCTCAAGCGATGGGACGTGTCGGTGAAG TCATTACGCGTGCATGGCAAGTCGCACATCGTATGAAACAACAACGCGGACCACTTGAAGGCGACAGTGAATATGATGAT AATAACCGTATCCGTCGTTATATTGCGAAATATACGATTAACCCTGCCATTACACACGGCATATCCGAATATGTCGGTTC TGTTGATGCCGGTAAATTAGCGGACCTTGTCATTTGGGATCCACGTTTCTTTGGTGTGAAACCGGACATGGTTGTTAAAG GTGGCATGATTAACGTGGCGGCAAATGGTGATGCAAATGGTTCTATCCCAACATCTGAACCGATTAAGTATCGTCACATG TACGGTCAATATGGTGGTAACTTACAAAGTACAGCCATCACTTTCGTATCACAAGCGGCTTATATGAACGGTATTCGTCG TACATTAGACTTAAAACGTGACGTGAGACCTGTACGTAACATTCGCCAATTAACAAAAAAAGATATGAAAAATAATAGTG CTTTACCAAAACTTGACGTTGATCCAGAAACATATGAAGTTTTCGTGGATGGGGAAAAAGTAACGAGTGAAGCGGCAACA GAATTACCGATGACCCAACGTTATTTCTTATTCTAA Protein sequence : MSFKMTESQYTSLYGPTVGDSIRLADTDLFAKVEKDYARYGDEVTFGGGKSIRDGMGQNPNATRDNKAVADLVISNAVVI DHDKVIKCDIGVKNGYIMKLGKAGNPDIMDGVDIIIGSSTDVIAAEGMIVTAGGIDTHVHFINPEQAEVALESGITTHIG GGTGASEGSKATTVTPGSWYIHRMLQAAENLPLNIGFTGKGQAVNPTALVEQIHAGVIGLKVHEDWGATPSALRHALEVA DDYDIQIALHADTLNEAGFMEDTMKAIGDKVIHMYHTEGAGGGHAPDLIKSAGYPNVLPSSTNPTLPYTHNTIDEHLDMV MITHHLNASIPEDVAFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRAWQVAHRMKQQRGPLEGDSEYDD NNRIRRYIAKYTINPAITHGISEYVGSVDAGKLADLVIWDPRFFGVKPDMVVKGGMINVAANGDANGSIPTSEPIKYRHM YGQYGGNLQSTAITFVSQAAYMNGIRRTLDLKRDVRPVRNIRQLTKKDMKNNSALPKLDVDPETYEVFVDGEKVTSEAAT ELPMTQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-172 | 63 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-174 | 63 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 6e-174 | 63 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-174 | 63 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 4e-171 | 62 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 4e-171 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_006014486.1 | urease subunit alpha | VFG0270 | Protein | 8e-157 | 58 |
