Gene Information

Name : SPSE_0294 (SPSE_0294)
Accession : YP_006014477.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 350729 - 351424 bp
Length : 696 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGATTGAATTGAAGGGGATCAATCGTCATTTTAAAAATGGGAACGAAACCAATCACATTTTAAAAGATATCGAGTTGCG
GATTGAACAAGGTGAATTTGTCGCGATTATGGGCCCTTCAGGATCAGGTAAGAGTACACTTATCAATATTTTAGGTTTTA
TCGATCGCGGTTATGAAGGGGACTATTTGTTTAATGGTGAGAATTACCAAAAAACGTCAGATAATGAATTGGCAGCGATT
CGTAACCGGACAGTAGGGTTTGTATTTCAAAATTTTAAACTCATACAAAACAACACGATTTTAGAAAATGTCAGTGTGCC
GTTATTGTATGCCGGAATGCGACCAGCTGAACGTAATCGACGTGTGTTGGACATTTTACATCGTGTCGGATTGTATGATA
AAGAAAATTTAGTGCCTAACAAATTATCAGGGGGACAACAACAGCGTGTGGCGATTGCTAGAGCGATTGTGAACCGTCCT
CGATTTATTATTGCCGATGAGCCAACTGGGGCACTCGATTCGAAAACGTCTGAAGATATTATGGCGTTGTTTATGGAGTT
GAATCAAGAGCAAGGCACAACGATGATTGTCGTGACACATGATCCAAAAGTCGCTGCACAAGCGGATCGTGTCATTCACA
TTTTGGATGGCCGAGTTCAAAGAGAAGAGGTGCTGTCGCATGGCGTACATCGCTAA

Protein sequence :
MIELKGINRHFKNGNETNHILKDIELRIEQGEFVAIMGPSGSGKSTLINILGFIDRGYEGDYLFNGENYQKTSDNELAAI
RNRTVGFVFQNFKLIQNNTILENVSVPLLYAGMRPAERNRRVLDILHRVGLYDKENLVPNKLSGGQQQRVAIARAIVNRP
RFIIADEPTGALDSKTSEDIMALFMELNQEQGTTMIVVTHDPKVAAQADRVIHILDGRVQREEVLSHGVHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSE_0294 YP_006014477.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-49 49
SPSE_0294 YP_006014477.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-40 48
SPSE_0294 YP_006014477.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-34 43