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Name : gabD (SPSE_0263) Accession : YP_006014446.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 309418 - 310806 bp Length : 1389 bp Strand : + Note : identified by match to protein family HMM PF00171 DNA sequence : ATGACAAAGTTTGATGTAGAAAACCCTTCAACAGGAGAAGTTATTAAAACTTATGCATTTACAGAAGAAGCTGAAATTCA TCATAAAATTGAACGTGCGTATGAAGCGTATTTATCATGGCGTGAAGTCGATGCGCATGAACGTTCACGTTTATTATGGC AATGGTCAACTTTAATTAAAGAGAACCGTGAAGCATTAGCAGAATTGATTACACTTGAAGGGGGCAAGCCTTATCAAGAA GCATTAGGTGAAGTGGATTACGCTGTTGGTTATGTGGATTGGTATGCTGAAGAAGTGAAGCGCATTTACGGTCGAACGAT TCCGGCTAACTCGCCAGATAAGAAAATTTTAGTGGATAAATTTCCGGTTGGGGTTGTAGGGGCCATTACACCGTGGAACT TCCCAGCTGCAATGATTACACGTAAAATGGCACCCGCGCTCGCAGCAGGTTGTACAATCGTATGTAAACCAGCGACACAA ACGCCCATGACGACGATTCGTTTAGTCGAATTAGCACATGAAGCGGGCATTCCTGAAGATGCGATTTCATACATTTTAGC AAGTGGTAAAACAGCAGGAAAAATTTTCACTGAACATGAACTGATCAACAAAGTGACATTCACAGGCTCTACACCCGTCG GTAAAAAGTTAATCGAACAATCAGCAGCATCTGTAAAAAATGTCACAATGGAACTCGGCGGTCTGGCACCACTCATCGTG CATAAAGATGCCGACATTGAACATGCAGTCGAACAAACGATTAAAACCAAATTTAGAAATGCAGGCCAAACTTGTATTTG TGCCAACCGTATTTATGTACACGAAGACATTGCAGAAGAATACGAAAAACAACTCATTGAACAAGTCCATGCCTTAAAAG TAGGGGACGGTATGGAGAAAGATGTGAAAATTGGACCACTCATTAACCAAAAAGGCGTCGATAAAGTGCTCGATCACATT CAAGATGCGGTTGAACATGGCGGTCAATTATCACGTGAATTAGATGACATTCAAGCGCTAGGTGGTAACTTCTTAAAACC AGTAGTCATTACGAATGTTAACCATGATATGAAATGTATGCACGAAGAAACATTCGGTCCAGTAGCGCCTGTAATGCGTT TTGCTGATATTGATGAAGCGATTCATTTAGCGAATGATACAGAATTTGGATTGGCATCTTACTTCTTCACAAACGATTAT CGTACAGGACTTTATATATACAACAACTTACATTACGGTGTCGTAGGTTGGAATGACGGTGCACCATCCGCACCGCATGC GCCATTTGGTGGTGTGAAAGAGAGTGGTTACGGCCGTGAAGGTGGTATTGAAGGCATCGAACCTTATCTAGAGACTAAAT ACCTCTCAATCGGTACAAAAACTAACTAA Protein sequence : MTKFDVENPSTGEVIKTYAFTEEAEIHHKIERAYEAYLSWREVDAHERSRLLWQWSTLIKENREALAELITLEGGKPYQE ALGEVDYAVGYVDWYAEEVKRIYGRTIPANSPDKKILVDKFPVGVVGAITPWNFPAAMITRKMAPALAAGCTIVCKPATQ TPMTTIRLVELAHEAGIPEDAISYILASGKTAGKIFTEHELINKVTFTGSTPVGKKLIEQSAASVKNVTMELGGLAPLIV HKDADIEHAVEQTIKTKFRNAGQTCICANRIYVHEDIAEEYEKQLIEQVHALKVGDGMEKDVKIGPLINQKGVDKVLDHI QDAVEHGGQLSRELDDIQALGGNFLKPVVITNVNHDMKCMHEETFGPVAPVMRFADIDEAIHLANDTEFGLASYFFTNDY RTGLYIYNNLHYGVVGWNDGAPSAPHAPFGGVKESGYGREGGIEGIEPYLETKYLSIGTKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-97 | 49 |
