Gene Information

Name : metC (SPSE_2482)
Accession : YP_006016526.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Unknown
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 2551201 - 2552376 bp
Length : 1176 bp
Strand : +
Note : identified by match to protein family HMM PF01053, match to protein family HMM PF01212

DNA sequence :
ATGACACGTTCTAAACAAACTGAACTGATTCATGATACACAACGTGGTGTCGCGTATCAATGCGCCAATCAACCGCTATA
TTATGCATCGACGTATCACCAACAACGATTAGGCGAGGCTGTTCCTTATGATTATGCGCGGAGTGGCAATCCTAACCGCG
AATTACTCGAAACGAAACTCGCACAACTGGAAGGCGGAAAGCGTGCGTTCGCATTCAACTCTGGTATCGCCGCGATTACG
GCTGTATTTTTAACTTTAAAAGCAGGCGACCACGTCATTTTACCGGATGATGTGTATGGTGGGACGTTTCGACTTACAGA
GCAAATTTTATCGCGCTTTGGCCTGACATTTACAACAGTGAATGCTGAAAATGTGGCAGAAATTCGTGCAGCGATTCGCC
CCAATACACGGCTCATCTATGTAGAAACACCGTCGAACCCGCTGTTCAAAATTACAGATATTCGAAAAGTCGTTCATATA
GCCCAAGCACACGACATTTTAGTAGCGGTGGACAATACGTTTATGACGCCACTTTGCCAAAATCCACTGGCGCTCGGTGC
AAATATCGTCATTCATAGCGCGACGAAGTTTTTAGGCGGCCATAGCGATCTCATTGCAGGGGCAGTCATTACAAATGATG
ACACACTCGCTGAAGCACTGTATTTAATACAAAACGGCACGGGAACCGCTTTGTCCGTATATGATAGTTGGACATTGACA
CAACACCTAAAAACATTTGTCGTCCGTTATGAACAATCTGTCAAAAGTGCACAACAAATTTATCATTTTTTAGAAGCACA
TCCGGCGATTGCGCAAGTGTACTATCCAGGAGACAATAGCGTACACCTCAGCCAAGCAAAACACGGAGGTGCTGTCATTG
GCTTCCGTTTAAGAGATGAAACTTATGCGCAACGATTTGTCGATCAGCTCACTTTACCACTCGTCTCAGTCAGTCTCGGC
GGTGTAGAAACGATTCTTTCACACCCTTATACGATGTCACATGCCGCCATCCCTCAAGAGATTCGAGAAGCGCGTGACAT
TACGTTCGGACTATTTCGATTGAGTGTTGGGTTGGAAGATGCTGACGAATTAATCGCCGACCTCGATCAAGCATTAAAGG
AGGGATCCTATGAGTCGACTACTGAACGCACTGAAAAACAATATTCTCGTCGCTGA

Protein sequence :
MTRSKQTELIHDTQRGVAYQCANQPLYYASTYHQQRLGEAVPYDYARSGNPNRELLETKLAQLEGGKRAFAFNSGIAAIT
AVFLTLKAGDHVILPDDVYGGTFRLTEQILSRFGLTFTTVNAENVAEIRAAIRPNTRLIYVETPSNPLFKITDIRKVVHI
AQAHDILVAVDNTFMTPLCQNPLALGANIVIHSATKFLGGHSDLIAGAVITNDDTLAEALYLIQNGTGTALSVYDSWTLT
QHLKTFVVRYEQSVKSAQQIYHFLEAHPAIAQVYYPGDNSVHLSQAKHGGAVIGFRLRDETYAQRFVDQLTLPLVSVSLG
GVETILSHPYTMSHAAIPQEIREARDITFGLFRLSVGLEDADELIADLDQALKEGSYESTTERTEKQYSRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-65 46
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-69 45
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-71 45