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Name : betB (SPSE_0240) Accession : YP_006014423.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.8 Position : 281811 - 283304 bp Length : 1494 bp Strand : + Note : identified by match to protein family HMM PF00171, match to protein family HMM TIGR01804 DNA sequence : ATGGAAGCTGTAAACCGATTATCTCGTCGCCAATATATAGACGGTGAATGGGTCGAGAGTAGTAATAAAGCAACACGTGA AATCATTAATCCGTACAATCAAGAGGTCATTTTAGAGGTGGCAGAAGGAACTGAAGCAGATGTTGAACGTGCTATCCTTG CAGCTCGTCGCGCATTTGATGAAGGGCGTTATGCGAACGAAACGGGTGAAACGAAAGGCCAAAAAGTGCGTGCGATTGCG GACAAAATTAAAGAAAACCGTGAAGAGTTAGCTTATTTAGAAACATTAGATACAGGTAAAACGTATGAAGAGTCATTAGT TGACATGGATGACATTCATAACGTGTTTATGTATTTTGCAGGTTTAGCAGATAAAGACGGTGGCGAATTGATTAACTCAC CGATTGAAAACACAGAAAGCAAAGTTGTGAAAGAGCCCATCGGTGTTGTGACACAAATCACACCGTGGAACTATCCGCTA TTACAAGCATCATGGAAGATTGCGCCTGCATTAGCGACAGGTTGTTCCCTTGTAATGAAGCCAAGTGAAATCACACCTTT AACGACCATTCGTGTTTTTGAATTAATGGAAGAAGTTGGTTTTCCAAAGGGTGTCATCAATTTAGTTTTAGGTGCAGGTT CTGAAATTGGCGATGTTTTATCTTCACACCCTGAAGTGGACTTAGTGTCATTCACAGGTGGTATTAAAACAGGTAAACAC ATTATGAAAAAAGCTGCCGATCATGTGACAAACATCGCGCTTGAATTAGGCGGTAAAAATCCAAATATTATTTTTGATGA TGCAGACTTTGATCTTGCGGTAGACCAAGCGTTGAATGGTGGCTTTTTCCACGCTGGTCAAGTATGTTCAGCAGGTTCAC GTATTATCGTTCACAATTCTATTAAAGACAAATTCGAAAAAGCGTTAATCGATGCGGTGAAAAAAATCCGCTTAGGTAAC GGTTTTGATAAGTCGACCGAACTCGGACCATTGATTTCAGCAGAACATCGTGCGAAAGTTGAAAATTATATGAAAGTCGC GAAAGAAGATGGCGCTACGATTGCGGTTGGCGGTCAACGCCCAGAACGTGAAGACCTACAAAATGGCTTTTTCTTTGAGC CAACTGTGATTACAGATTGTGATACATCGATGCGTATCGTTCAAGAGGAAGTATTTGGTCCTGTTGTGACAGTGGAAGGC TTTGAGACAGAAGAAGAAGCGATTCGTTTAGCGAACGACTCTATTTACGGTCTTGCGGGTGGTGTTTTTACGAAAGATAT CGGTAAAGCCCAACGCGTCGCAAGCAAAATGAGAATGGGTACCGTTTGGATTAATGACTTCCATCCTTATTTCGCACAAG CCCCATGGGGTGGTTACAAACAATCAGGTATCGGCCGTGAACTCGGGCATCAAGGTTTAGAAGAATATTTAGAAACGAAA CATATTTTAATGAATACTAACCCTGAACCAGTGAAATGGTTTAGCCAATCTTAA Protein sequence : MEAVNRLSRRQYIDGEWVESSNKATREIINPYNQEVILEVAEGTEADVERAILAARRAFDEGRYANETGETKGQKVRAIA DKIKENREELAYLETLDTGKTYEESLVDMDDIHNVFMYFAGLADKDGGELINSPIENTESKVVKEPIGVVTQITPWNYPL LQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGVINLVLGAGSEIGDVLSSHPEVDLVSFTGGIKTGKH IMKKAADHVTNIALELGGKNPNIIFDDADFDLAVDQALNGGFFHAGQVCSAGSRIIVHNSIKDKFEKALIDAVKKIRLGN GFDKSTELGPLISAEHRAKVENYMKVAKEDGATIAVGGQRPEREDLQNGFFFEPTVITDCDTSMRIVQEEVFGPVVTVEG FETEEEAIRLANDSIYGLAGGVFTKDIGKAQRVASKMRMGTVWINDFHPYFAQAPWGGYKQSGIGRELGHQGLEEYLETK HILMNTNPEPVKWFSQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-66 | 41 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-72 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| betB | YP_006014423.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 1e-72 | 41 |
