Gene Information

Name : blaR1-2 (SPSE_2388)
Accession : YP_006016440.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Resistance
Product : regulatory protein blaR1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2455063 - 2456820 bp
Length : 1758 bp
Strand : +
Note : identified by match to protein family HMM PF00905, match to protein family HMM PF05569

DNA sequence : 
ATGGCTAAGTTATTAATAATGAGCATAGTAAGCTTTTGTTTTATATTTCTATTGTTATTATTTTTTAGGTACATATTAAA
ACGCTATTTTAATTATATGTTAAATTATAAAGTTTGGTATCTAACTCTTCTTGCAGGATTAATTCCTTTCATTCCTATTA
AATTCTCTCTTTTTAAATTTAATAATGTGAATAATCAAGCGCCCACAGTTGAAAGTAAGTCACACGACTTGAACCATAAC
ATAAATACCACCAAACCTATTCAAGAGTTCGCAACAGATATCCATAAGTTTAATTGGGATTCAATTGATAATATCTGCAC
AGTTATTTGGATAGTTTTAGTTATTATTTTAAGTTTTAAATTTTTGAAAGCCTTATTATATCTTAAATATTTAAAGAAAC
AGTCACTTTATCTAAACGAAAATGAAAAAAATAAAATAGATACGATACTTTTCAACCATCAATATAAAAAAAATATTGTG
ATTCGAAAAGCAGAGACTATTCAATCTCCAATAACTTTTTGGTATGGGAAATATATTATTTTGATTCCTAGTTCATATTT
TAAAAGTGTAATTGACAAAAGACTAAAATATATAATATTGCATGAATATGCTCATGCTAAAAATAGAGATACTTTACATT
TAATTATCTTTAATATCTTCTCTATTATTATGAGTTACAATCCATTAGTACATATTGTAAAAAGAAAGATAATTCATGAC
AATGAAGTAGAAGCCGATAGATTTGTCCTTAATAATATTAACAAAAATGAATTTAAAACTTATGCGGAATCTATTATGGA
CTCCGTATTAAATGTTCCATTTTTTAATAAAAATATATTAAGCCATTCATTTAATGGTAAAAAGTCATTACTCAAAAGAA
GATTAATTAATATAAAAGAAGCCAATCTGAAAAAACAGTCCAAATTAATTCTAATTTTTATTTGTATTTTTACTTTTTTG
CTCATGGTAATTCAAAGCCAGTTTTTGATGGGGCAATCCATAACTGATTATAATTATAAAAAGCCCTTACACAACGATTA
CCAAATTTTAGATAAAAGTAAAATTTTTGGTTCAAATAGTGGATCTTTCGTCATGTACAGCATGAAGAAAGACAAATACT
ATATTTATAACGAAAAAGAAAGTAGAAAAAGGTATTCTCCTAATTCAACTTATAAAATTTATTTAGCTATGTTTGGACTT
GACCGACATATTATAAATGATGAAAATTCACGTATGTCATGGAATCATAAGCATTACCCTTTTGATGCTTGGAATAAGGA
ACAAGATTTAAATACAGCAATGCAAAATTCAGTTAATTGGTACTTCGAACGTATTAGCGATCAAATACCAAAGAACTATA
CTGCGACTCAACTCAAGCAATTAAATTATGGTAATAAAAATTTGGGAAGTTATAAAAGCTATTGGATGGAAGATAGTTTG
AAAATATCTAATCTTGAACAAGTAATAGTTTTTAAAAATATGATGGAACAAAATAACCATTTTAGTAAAAAAGCAAAGAA
TCAATTATCTTCTTCATTATTGATTAAGAAAAATGAAAAGTATGAACTGTATGGGAAAACAGGTACAGGTATAGTAAACG
GGAAGTATAATAATGGGTGGTTTGTAGGTTACGTAATTACAAATCATGATAAGTATTATTTTGCTACACATTTATCAGAT
GGAAAGCCATCTGGGAAAAATGCTGAATTAATCAGTGAAAAAATATTAAAAGAAATGGGTGTTTTAAATGGCCAATAA

Protein sequence : 
MAKLLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLLAGLIPFIPIKFSLFKFNNVNNQAPTVESKSHDLNHN
INTTKPIQEFATDIHKFNWDSIDNICTVIWIVLVIILSFKFLKALLYLKYLKKQSLYLNENEKNKIDTILFNHQYKKNIV
IRKAETIQSPITFWYGKYIILIPSSYFKSVIDKRLKYIILHEYAHAKNRDTLHLIIFNIFSIIMSYNPLVHIVKRKIIHD
NEVEADRFVLNNINKNEFKTYAESIMDSVLNVPFFNKNILSHSFNGKKSLLKRRLINIKEANLKKQSKLILIFICIFTFL
LMVIQSQFLMGQSITDYNYKKPLHNDYQILDKSKIFGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPNSTYKIYLAMFGL
DRHIINDENSRMSWNHKHYPFDAWNKEQDLNTAMQNSVNWYFERISDQIPKNYTATQLKQLNYGNKNLGSYKSYWMEDSL
KISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYELYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFATHLSD
GKPSGKNAELISEKILKEMGVLNGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaR1 YP_253678.1 bla regulator protein blaR1 Not tested ¥ÕSh1 Protein 0.0 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_005054.2598288.p0 Protein 0.0 99
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_002952.2858974.p0 Protein 0.0 99
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_005011.2598315.p0 Protein 0.0 95
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_007931.3978624.p0 Protein 0.0 95
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_010419.6155810.p0 Protein 0.0 95
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_005951.2853425.p0 Protein 0.0 95
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_003140.1122764.p0 Protein 0.0 95
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_005127.2610353.p0 Protein 0.0 95
blaR1-2 YP_006016440.1 regulatory protein blaR1 NC_009477.5169314.p0 Protein 0.0 94
blaR1-2 YP_006016440.1 regulatory protein blaR1 AE015929.1.gene1652. Protein 0.0 88