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Name : kdpB (SPSE_2364) Accession : YP_006016417.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase, B subunit Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 2427695 - 2429719 bp Length : 2025 bp Strand : + Note : identified by match to protein family HMM PF00122, match to protein family HMM PF00702, match to protein family HMM TIGR01494, match to protein family HMM TIGR01497 DNA sequence : ATGAAACAATCATCTCATGTGTTGAATCGCGCGATTGTCAGACAAGCCATCAAAGAAAGTTTTATTAAATTAAACCCTGT ATCTCTCATTAAAAATCCAATTATGTTTGTCGTAGAGGTGGGGATGGTTTTAACGTTAATTATGACAATCGTGCCACAAA TTTTTACAGATGGCGCGATGTCACGACTTTATTTATTTACGATTTTCATCATTTTATTCTTTACCGTGCTCTTTTCTAAC TTTTCAGAAGCGATTGCAGAAGGTCGCGGTAAAGCACAGGCGAACAGTCTTCGAGAAACAAAGTCTCATATGATTGCACG TCGCATAGTCAACGCTGAAGTATACGAAACGGTTGATGCGTCAGCTTTAAAACGAGGTGACCGTATTCTCGTAAAATCAG GTGAAATGATTCCGTCAGACGGCACCATTATTAAAGGGATTGCCACAGTTGATGAATCTGCTATTACCGGAGAGTCTGCC CCTGTTATAAAAGAATCAGGTGGCGATTTTTCGGGTGTCATTGGTGGAACAACTGTGACGTCGGACTGGCTCATTATTGA AGTAGACAGTGAAGAAGGTGCGACATTTTTAGATAAAATGATTGCCCTAGTTGAAGGGGCCCAACGTAAAAAAACACCAA ACGAAATTGCGCTGTTTACATTGCTAATGACATTAACGATTATTTTTCTCGTTGTCATTTTAACGTTGTATCCCATTGCC CAATATTTAAATCTGAATGTCCCTATCACATCATTGATTGCATTGACAGTTTGTTTAATTCCAACAACGATCGGGGGATT ACTTTCTGCCATTGGGATTGCCGGTATGGACCGTGTTACACAATTTAATATTTTGGCGAAAAGTGGACGCGCGATTGAAA CGTGTGGCGATGTCGATGTCTTAATTTTAGATAAAACAGGCACAATCACGTACGGTAATCGTTTAGCGGAATCCTTACTG CCTGTTCGGGAGGAATGGTATGACAGATTACTCGTCGCAGCGTATGAAAGTTCCGTTGAAGATGATACACCTGAAGGCAA AAGTATCGTCACTTTAGCCAAACGTTCATCCGTACAGTTGCCAGAGGAGGTCAAAGGAGATTATCGACCATTCAAAGCAG AAACACGTATGAGTGGTATCATTATCGGCGAACGTTCAGTCTTTAAAGGGGCACCTAATAGTATGTTGAAATATGTGAAA CAACAAGGTGGGGTGATTCCTTCCAATATCGAAGCACTCGTTACTGAAGTCTCTAGTAAAGGCGGCACACCGTTAATTGT CGTTGAAAACCAAACGATCTTAGGCGTGATCTATTTAAAAGATGTCATTAAAGAAGGCTTGGTGGAACGTTTCCAAGAGT TGCGTCAAATGGGCATCGAAACGGTGATGTGTACCGGTGACAACGAATTGACTGCCGCTACAATTGCAAAAGAAGCCAGT GTCGACCGTTTTATCGCCGAATGTAAACCGGAAGATAAAATCAAAGTCATTAAAGAAGAACAAGAAAAAGGCCACATTGT TGCGATGACAGGTGATGGAACGAATGACGCCCCTGCTCTTGCCCAAGCGAATGTCGGCCTAGCGATGAATTCAGGGACAT TAAGCGCAAAAGAAGCCGCAAACTTAATTGATTTAGATTCCAATCCAACGAAATTAATGGAAGTCGTCAAAATCGGTAAA CAGTTGCTCATGACGAGGGGCGCATTAACAACATTTAGTATTGCGAATGATATTGCCAAATATTTTGCCATTTTACCTGC TATGATGATGGTCACGATACCTGAAATGGGTCGCTTAAATATTATGCAGTTACATTCCCCTGAATCTGCCATTATTTCAG CACTCATCTTTAATGCACTCATTATTGCATTGCTGATTCCTATTGCGATGAAAGGGGTGCGCATTAAAGGGGCGTCGACT GAAACGGTATTGATGAAAAATATGTTGGTCTATGGACTCGGCGGGATGATTGTCCCTTTTATTGGCATTAAATTAATCGA TCTTTTAATTCAATGGTGGCTATAG Protein sequence : MKQSSHVLNRAIVRQAIKESFIKLNPVSLIKNPIMFVVEVGMVLTLIMTIVPQIFTDGAMSRLYLFTIFIILFFTVLFSN FSEAIAEGRGKAQANSLRETKSHMIARRIVNAEVYETVDASALKRGDRILVKSGEMIPSDGTIIKGIATVDESAITGESA PVIKESGGDFSGVIGGTTVTSDWLIIEVDSEEGATFLDKMIALVEGAQRKKTPNEIALFTLLMTLTIIFLVVILTLYPIA QYLNLNVPITSLIALTVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRAIETCGDVDVLILDKTGTITYGNRLAESLL PVREEWYDRLLVAAYESSVEDDTPEGKSIVTLAKRSSVQLPEEVKGDYRPFKAETRMSGIIIGERSVFKGAPNSMLKYVK QQGGVIPSNIEALVTEVSSKGGTPLIVVENQTILGVIYLKDVIKEGLVERFQELRQMGIETVMCTGDNELTAATIAKEAS VDRFIAECKPEDKIKVIKEEQEKGHIVAMTGDGTNDAPALAQANVGLAMNSGTLSAKEAANLIDLDSNPTKLMEVVKIGK QLLMTRGALTTFSIANDIAKYFAILPAMMMVTIPEMGRLNIMQLHSPESAIISALIFNALIIALLIPIAMKGVRIKGAST ETVLMKNMLVYGLGGMIVPFIGIKLIDLLIQWWL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 0.0 | 75 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 0.0 | 75 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-126 | 55 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-126 | 55 |
