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Name : kdpD (SPSE_2362) Accession : YP_006016415.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : two component sensor protein KdpD Function : - COG functional category : - COG ID : - EC number : - Position : 2423105 - 2425729 bp Length : 2625 bp Strand : - Note : identified by match to protein family HMM PF00512, match to protein family HMM PF02518, match to protein family HMM PF02702 DNA sequence : ATGGAGCGTCATCTAACGATAAAAAGAGGAGCATTAACGATATATTTGGGTTATTCTCCGGGTGTAGGTAAAACTTATGA AATGTTATCCAATGCGATCGATGCTTATCACGAAGGTGCGGATATTAAAATTGGTTATATCGAGCCACATCAACGTAAAG AAACTCAAGCCCTTGCTGAACAATTGCCAGTTATTCAAACAAAATCTAAAAATCACGGCAGCCATACATTCCACTATTTA GATGTTGATCAAATTATTGAAGACGACCCAGATGTGGTCCTCATCGATGAATTAGCGCATACCAACATTTCAAAAGAGCG ACATGAAAAAAGGTACATGGATATTGAAGAAATACTTTCCCACGGCATTGATGTTCATACAACATTAAATATTCAGCACA TCGAAAGTTTGAGTGAACAAGTGGCGTTACTGACGGGGGTCAAAATTAAAGAGCGTGTGCCTGACCAATTCATTATGTCG AGTGATGCAATAGAGGTCATTGATATTTCACCAAAGCAACTCATCAACCGACTTAAAGCAGGAAAAGTGTATAAAAAGGA ACGACTCGACACAGCATTTTCGCATTTTTTTACATATGAGAACCTTACTGAATTACGAGAATTAACATTGAGAACAGCCG CTGATATGATGAGTCAAAAAGAGCATCTTTATAAGAAAAATACAGATATTACCCCGCATGTCGCAGTTGCTATCAGTGGA AGTATCAGCAATGAAACCGTCATTCGAGAGGCGCGTCGCATTGCGAACCGTGAGCATGCTCAATTTACAGCGGTGTATAT TGACGTGTTTGATCATGAAGGCAAACAGTATGCAAATAATAGTCAAGTGCACCAAAATTTAATGCTGGCGCAGTCGTTAG GGGCATCCGTCAAAGTGATATATGATAATCAAATTGCATCGGGTCTCGATGATTGGTGTAAATCCCAAAAAGTGACGAAA CTCGTTATCGGTCAACATATGAATGATAAATGGCATACACGGTTGAAGCGGCCTTTAATTGACCAATTACTTGATTTAAA ACATCATTATAAAATTGAAATTGTGCCGATTAAACATATTCAAATGAAAGCAAAGCCTGAGCGACAACATCAACATATGC AACAAAAGCGTTGGACTGTCGATATTTTTAAAATGATTGCGATTCAAGCGATTTGCGTACTGTTAGGCTTGTGGATTTAT AGCACGGGCAAAGGAGAACAAGATACAATCATTCTACTGTTATTTTTATTAGGTATTGTCGTTTTAAGTATGTGGACGCA ATCGTATTTAATCGGTTTTTTCGCTGCGATTTTAAACGTGTTGGTGTTTAATTTCTTTTTTACTGTGCCAAGATTTACGT TTGAGGTTTATCGCTTTGACTATCCTATCACTTTCACGATCAGTATTATCGTGAGTATCGTCACGAGTGGCTTATTAAAA CAAATTAAGCATCAGTACATCGTCACGAAACATCAATTGTACCGGACCGATATTTTGTTGCAGTTTAATGATTCAATTAA ACAAACGTACACGATTCCTGATTTATTAGTGAATGCAAGACATCAAATTCAACATCTGTTAAAGCAAGAAGTTACGATTT ATTTAGTGGAAGATGAAAAAATTTCAAAAACGATACCGGTTGAAGGGCCACAGACTAATGATTCTCGCCACCAACAAGCG CTAAGTTGGATCATTAAAAACCAAAAGCGTGCAGGAGCAACAACGGATACATTTCCAGGTATTCACTATTTGCTCATACC GATTGGCACAAAACCTGTTAAAGCAATCGTTTCCATACACTTTTCTGAAGCGCAAATTATTGATTCCTATGACAATTCTA TTTTAGAGTCCATGTTGAATGAAATGTCGCTTGCTGTAGAGAACTTGAGCTTACTTCGTCAAACACGAGAGTCGATGTTA CGAGCTGAGCGGGAGGTGGCACGTGCCCACTTTTTACGCTCCATTTCTCATGATATTCGCACACCACTAACTTCTATCAT CGGTAATTTGGACGTCTTATTACTCAATGGGAAAGAAATGCCTCGCGCAGAACAACAGCAGTTAGTTTCCCGGTCGTTTG ACGAAGCCCAGTATTTACACATGCTCGTTTCCAATATTTTGTCACTTACCAGACTCGAGCATTCGAATATGAAGCTCAAC CGCCAACTGTATCTCATTGAAGAATTAGTTGAAGAAATCGAATCCGTGCTTGAACGTAGACGGCTCAACAAGCAAGTGAA AGTGTCGGCATTACATGAGATATGCTTCGTCGATATTGATAGTCAGCTCATTTTACAAGCGGTTTTTAATTTGATTGAAA ACGCGTTAAAACATACGCCACCTGAAACACCTATTACGTTAAGAATCAATAAAAATGAACCCCACATATTATTTGAGGTA ATCGATAGGGGACCGGGATTGTCGGATGAAGAACAACAAACGATTTTCCAACCTTTTGAGAAACATCAACTTTTCAAAGA TAACAAGAAAGATAGTATGGGACTCGGACTTTATCTCGTGCAGGCGATTCTACAAAAGCATGACAGTCAATTAAAATATC GACAAAATGAGCCGCATGGGAGTATATTTTATTTCAACTTACCTTTTGAAAAAAATACAAATTGA Protein sequence : MERHLTIKRGALTIYLGYSPGVGKTYEMLSNAIDAYHEGADIKIGYIEPHQRKETQALAEQLPVIQTKSKNHGSHTFHYL DVDQIIEDDPDVVLIDELAHTNISKERHEKRYMDIEEILSHGIDVHTTLNIQHIESLSEQVALLTGVKIKERVPDQFIMS SDAIEVIDISPKQLINRLKAGKVYKKERLDTAFSHFFTYENLTELRELTLRTAADMMSQKEHLYKKNTDITPHVAVAISG SISNETVIREARRIANREHAQFTAVYIDVFDHEGKQYANNSQVHQNLMLAQSLGASVKVIYDNQIASGLDDWCKSQKVTK LVIGQHMNDKWHTRLKRPLIDQLLDLKHHYKIEIVPIKHIQMKAKPERQHQHMQQKRWTVDIFKMIAIQAICVLLGLWIY STGKGEQDTIILLLFLLGIVVLSMWTQSYLIGFFAAILNVLVFNFFFTVPRFTFEVYRFDYPITFTISIIVSIVTSGLLK QIKHQYIVTKHQLYRTDILLQFNDSIKQTYTIPDLLVNARHQIQHLLKQEVTIYLVEDEKISKTIPVEGPQTNDSRHQQA LSWIIKNQKRAGATTDTFPGIHYLLIPIGTKPVKAIVSIHFSEAQIIDSYDNSILESMLNEMSLAVENLSLLRQTRESML RAEREVARAHFLRSISHDIRTPLTSIIGNLDVLLLNGKEMPRAEQQQLVSRSFDEAQYLHMLVSNILSLTRLEHSNMKLN RQLYLIEELVEEIESVLERRRLNKQVKVSALHEICFVDIDSQLILQAVFNLIENALKHTPPETPITLRINKNEPHILFEV IDRGPGLSDEEQQTIFQPFEKHQLFKDNKKDSMGLGLYLVQAILQKHDSQLKYRQNEPHGSIFYFNLPFEKNTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_370595.1 | sensor protein KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
| kdpD | NP_373307.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
| SH0032 | YP_251947.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 61 |
| kdpD | YP_190032.1 | sensor histidine kinase KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
| SAR0069 | YP_039537.1 | sensor kinase | Not tested | Type-II SCCmec | Protein | 0.0 | 61 |
