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Name : treC (SPSE_2341) Accession : YP_006016395.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : - COG ID : - EC number : 3.2.1.93 Position : 2398111 - 2399742 bp Length : 1632 bp Strand : - Note : identified by match to protein family HMM PF00128, match to protein family HMM TIGR02403 DNA sequence : ATGGTAAGGCAAGATTGGAAAAAATCAGTCGTGTATCAGATTTATCCAAAGTCTTTTAACGATACGACAGGTAATGGGGA AGGCGATTTAAAAGGGATTATTGAGAAACTGGATTATTTACAATTTTTAGGGGTCGATTATTTATGGCTCACACCGATTT ACGATTCGCCGATGAATGATAACGGATACGACATTCGTGATTACTATCAAGTGAATGCACAATTTGGGGATAAAGATGAC TTACGTACATTGATTGATGAAGCGCATGCACGAGGATTGAAAATGATGCTCGATATTGTTATCAATCATACATCTACGGA ACACGAATGGTTTCAACAAGCGCAGCAGTCGGTAGACAATCCGTATCGAGATTATTACTTTTTCAGACGTTCAGAAGACG GGCCGCCGACGAATTGGTTATCGAAGTTTGGTGGGAATGCATGGCAATACGATGAGCAAACGGATGCTTATTATTTGCAT TTATTTGATGTTACGCAAGCGGATTTGAACTGGGATAATCCCGAAGTGCGTCACGCATTGTACGAAATGATTAATTATTG GATTGATTTCGGTGTAGATGGTTTTCGATTTGACGTAATTAACTTGATTTCTAAAGATACGTTTGAAGACTCAAATGAGA TTGGTAAAGAGTATTACACTGATGGGCCACGTGTTCATGACTATATCCATGAAATGAATCGTCATACGTTTGGTGATCGA GATATGATGACAGTTGGGGAAATGTCGTCTACATCCATTGACCATTGTATTCAATATACGAATCCAGAGCGCCAAGAGTT GAGCAGCGTGTTTAACTTTCATCATTTAAAAGTCGACTATCGTGATGGACAAAAGTGGACGAACCAAAAATTTGATTTGT TGCAATTGAAGCAGATTTTGATGGAATGGCAAACGAAAATGTATGCTGGTAATGGTTGGAATGCGATTTTTTGGTGTAAT CATGATCAACCACGTGTCGTTTCAAGGTTTGGTAGTGATGCGACTGAAGCGTTACGTCAACAAAGTGCCAAAACGCTAGC CATTGCTTTACATTTATTACAAGGGACACCCTATATTTACCAAGGTGAAGAAATTGGTATGACAGATCCACATTTTCAAT CGATTCAACAATATCGTGATGTAGAGTCGTTGAATGCGTATCGTGAAATGCGTGAAGCCGGGATAGATGAAGCGGAAATT TTAACGATACTCGGACAAAAATCACGGGATAATTCACGTACGCCGATGCAATGGAATGATGAAGCACATGCTGGTTTTAC AACTGGAACGCCGTGGATTGAAGTGGCAAATAATTACAACACGGTGAATGTTGAAGCGGCCATGGCAGAACCGGAATCCA TTTTATACACGTACAAAAAGTTAATTCAGTTACGTCATGAACACGATATAGTGACGTACGGAGAAGTTGTACCGCGTTAT CTCGATCATCCACAACTGTTTGTGTATGAACGACGCTATCAAGGGGACACTTGGTTGATTATTGCGAATATGACATCAGA AAAAGTGACATTGCCAGAAGATTTGGATCGCTCTGGTTCGGTCGTTCTTCAAAATGGTATAATAGAAGGGAATGAGCTCG AAGCATACGCAACAATCGTTGTAGCGAGATAA Protein sequence : MVRQDWKKSVVYQIYPKSFNDTTGNGEGDLKGIIEKLDYLQFLGVDYLWLTPIYDSPMNDNGYDIRDYYQVNAQFGDKDD LRTLIDEAHARGLKMMLDIVINHTSTEHEWFQQAQQSVDNPYRDYYFFRRSEDGPPTNWLSKFGGNAWQYDEQTDAYYLH LFDVTQADLNWDNPEVRHALYEMINYWIDFGVDGFRFDVINLISKDTFEDSNEIGKEYYTDGPRVHDYIHEMNRHTFGDR DMMTVGEMSSTSIDHCIQYTNPERQELSSVFNFHHLKVDYRDGQKWTNQKFDLLQLKQILMEWQTKMYAGNGWNAIFWCN HDQPRVVSRFGSDATEALRQQSAKTLAIALHLLQGTPYIYQGEEIGMTDPHFQSIQQYRDVESLNAYREMREAGIDEAEI LTILGQKSRDNSRTPMQWNDEAHAGFTTGTPWIEVANNYNTVNVEAAMAEPESILYTYKKLIQLRHEHDIVTYGEVVPRY LDHPQLFVYERRYQGDTWLIIANMTSEKVTLPEDLDRSGSVVLQNGIIEGNELEAYATIVVAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-125 | 49 |
