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Name : lysS (SPSE_2293) Accession : YP_006016351.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2348267 - 2349754 bp Length : 1488 bp Strand : - Note : identified by match to protein family HMM PF00152, match to protein family HMM PF01336, match to protein family HMM TIGR00499 DNA sequence : ATGACAGAAGAATTGAATGACCAAATGCAGGTCCGTCGACAAAAATTACAAGAATTAAGAGACTTAGGGATTGATCCATT CGGTGAGAAGTTTGAGCGTACTGGAACTGCGGAAACGTTAAAAGCTCAATGGGATCAATACGCAAAAGAAGAACTTGCTG AAAAAGAAACGGAAAGTCATACGGTAATTGCAGGTCGTATTATGACAAAACGTGGTAAAGGTAAAGCAGGATTTGCGCAC ATTCAAGATTTATCGGGTCAAATTCAAATTTATGTACGTAAAGACCAAGTGGGTGACGCACAATTTGGTATTTGGAATAC TGCAGACTTAGGTGATATTGTCGGCGTTGAAGGTATTATGTTTAAAACAAATACTGGAGAATTATCAGTAAAAGCGAAGT CATTCAAACTTTTATCTAAAGCGTTACGTCCATTACCGGACAAACATCACGGTTTACAAGATATTGAACAACGCTACCGT CAACGTTATCTTGACTTAATTACCAACGAAGAAAGCACGCAAACATTTATTAATCGTAGCCGTATTCTTCAAGAAATGCG TAATTACCTTAATGAAAAAGGGTTTTTAGAAGTGGAAACACCAATGATGCATCAAATCGCAGGGGGTGCTGCAGCGAAGC CATTCGTGACACACCACAACGCATTGGATGCAACACTTTACATGCGTATTGCCATCGAACTACACCTTAAACGTTTAATC GTAGGTGGTTTGGAGAAAGTATATGAAATCGGACGTGTATTCCGTAACGAAGGTGTTTCTACACGTCATAACCCAGAATT TACGATGATTGAATTGTATGAAGCGTATGCAGATTACAAAGATATTATGTCATTAACTGAAGAATTAGTTGCACACATCG CTCGTCGCGTATTAGGTACAACTTCAGTTCAGTACGGTGATGAAACAATTAATTTAGAACCACAATGGCGTAGATTACAC ATGGTCGATGCCGTTAAAGAAGCGACAGGTGTAGACTTTTATGAAGTGAAATCAGACAAAGAAGCACACGAATTAGCGAA AGCACATGGTATTGAAGTAGATGATAATATGAAGTATGGTCACATTCTAAATGAATTTTTCGAACAAAAAGTAGAAGAAA CTTTAATTCAACCGACATTCATTTATGGTCATCCAATTGAAATCTCTCCTTTAGCTAAGAAGAACCCTGAAGATCCACGC TTCACTGATCGCTTTGAGTTGTTTATTGTAGGTCGCGAACATGCGAATGCGTTCACAGAATTAAATGACCCAATCGATCA ACGTCAGCGCTTTGAAGCACAATTAGTAGAAAAAGAGCAAGGTAACGACGAAGCACATGAAATGGATGAGGATTTCATTG AGGCATTAGAATACGGTATGCCGCCAACAGGTGGATTAGGTATCGGTATTGACCGCCTCGTGATGTTATTAACGAATTCT CCATCTATTCGTGACGTGTTATTATTCCCATATATGCGCCAAAAATAA Protein sequence : MTEELNDQMQVRRQKLQELRDLGIDPFGEKFERTGTAETLKAQWDQYAKEELAEKETESHTVIAGRIMTKRGKGKAGFAH IQDLSGQIQIYVRKDQVGDAQFGIWNTADLGDIVGVEGIMFKTNTGELSVKAKSFKLLSKALRPLPDKHHGLQDIEQRYR QRYLDLITNEESTQTFINRSRILQEMRNYLNEKGFLEVETPMMHQIAGGAAAKPFVTHHNALDATLYMRIAIELHLKRLI VGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTEELVAHIARRVLGTTSVQYGDETINLEPQWRRLH MVDAVKEATGVDFYEVKSDKEAHELAKAHGIEVDDNMKYGHILNEFFEQKVEETLIQPTFIYGHPIEISPLAKKNPEDPR FTDRFELFIVGREHANAFTELNDPIDQRQRFEAQLVEKEQGNDEAHEMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTNS PSIRDVLLFPYMRQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-114 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006016351.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 9e-115 | 50 |
