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Name : hlb (SPSE_2228) Accession : YP_006016301.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : beta-hemolysin Function : - COG functional category : - COG ID : - EC number : 3.1.4.12 Position : 2285305 - 2286297 bp Length : 993 bp Strand : + Note : identified by match to protein family HMM PF03372, match to protein family HMM TIGR03395 DNA sequence : ATGAAAAAATTAAAACAAAAAAAACGATTAACATCACTATTATTAGCCACTACAATGCTTTTAGGTATCATGAATACTGG CGTTAGCCATGCTGCTTCAGACGAAAATCAAGCGGAATTAAAATTAGCGACGCACAATGTTTATATGCTTTCTGGTTTCC TTTATCCTAACTGGGGGCAAAGTAAGCGTGCAGATTTAATTTCAAAATCTAAATATATACAAGATAATGATGTCGTAATT TTCAATGAAGCATTCTATCCTGCTTCAGCAAATCAACTGTTCAATAATCTAAAATCTTCTTATCCTTATCAAACTGCGGT ACTTGGCCGTTCCACTTCAGGATGGGACCGCACTGAAGGTCATTATTCAAGTACGACTTTTGAAAATGGTGGTGTTGCTA TCGTAAGTAAATACCCTATTAGAGAGCGAATTCAACATATCTTCCAGCACGGATGCGGCTTTGATAATGATAGTAATAAA GGCTTTGTCTATACTAAAATTGAAAAAAATGGAAAATTCGTTCACGTTATCGGTACACACACACAATCTGAGGATACACG CTGCTCAGTAGGTCAAGATAGAGCAATTAGAGCTGAACAAATGAAAGAAATTAGCAATTTTGTAAAAAGTAAAAATATCC CTAAAGATGAAGTAGTTTACATCGGTGGTGATATGAATGTAAATAAAAATGCTGGAAATGGTGAATTCCAAGACATGTTG AAAAACTTAAATGTCAGCGATGTAACTTATACAGGTCATTCAAGCACATGGGATCCTCAATCTAACTCAATTGCCAAATA CAATTATCCTAATAGTGCGCCAGAGTATTTAGACTATATTTTTGTAGATAAAGACCATCGCCAACCAGGCCAACTCATTA ATGAAGCTGTAGCTGAAAAATCACCAACTTGGGATGTTTATAAATTCCCATACCTTTATGTCTACAATGACTACTCTGAT CACTATCCAGTAAAAGCGTATAGTAAGTCATAG Protein sequence : MKKLKQKKRLTSLLLATTMLLGIMNTGVSHAASDENQAELKLATHNVYMLSGFLYPNWGQSKRADLISKSKYIQDNDVVI FNEAFYPASANQLFNNLKSSYPYQTAVLGRSTSGWDRTEGHYSSTTFENGGVAIVSKYPIRERIQHIFQHGCGFDNDSNK GFVYTKIEKNGKFVHVIGTHTQSEDTRCSVGQDRAIRAEQMKEISNFVKSKNIPKDEVVYIGGDMNVNKNAGNGEFQDML KNLNVSDVTYTGHSSTWDPQSNSIAKYNYPNSAPEYLDYIFVDKDHRQPGQLINEAVAEKSPTWDVYKFPYLYVYNDYSD HYPVKAYSKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlb | NP_646757.1 | truncated beta-hemplysin | Not tested | ¥ÕSa3 | Protein | 1e-100 | 77 |
| truncated-hlb | NP_372527.1 | hypothetical protein | Not tested | ¥ÕSa3 | Protein | 4e-100 | 77 |
| hlb | NP_375112.1 | hypothetical protein | Not tested | ¥ÕSa3 | Protein | 3e-100 | 77 |
| unnamed | CAA70683.2 | sphingomyelinase-c | Virulence | LIPI-2 | Protein | 2e-71 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlb | YP_006016301.1 | beta-hemolysin | VFG1798 | Protein | 2e-109 | 75 |
| hlb | YP_006016301.1 | beta-hemolysin | VFG0674 | Protein | 1e-71 | 54 |
