Gene Information

Name : SPSE_2131 (SPSE_2131)
Accession : YP_006016208.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2197211 - 2198131 bp
Length : 921 bp
Strand : +
Note : identified by match to protein family HMM PF01297

DNA sequence :
ATGATGAAAAGAATTTTCGCCATAGCGATTCTCTTTGTGTTACTCGCTGCATGTGGTATCAATAAAGGAGACGAATCCGA
GCATAAATTAAAAATTGTCACTACGAACTCTATTCTTTACGATATGACTAAAAATATTACAGGCGATAAGGCCGAAATTC
ATTCAATTGTCCCTGTTGGTCAAGATCCTCACGAATACGAAATTAAACCGAAAGACGTTCAAGCGTTAACTGACGCTGAT
GTCATTATTTACAATGGTTTCAACCTTGAAAGTGGTAATGGTTGGTTTGAAAAGGCATTGAAACAAGCAAACAAATCGAT
TAAAGATGATTCAGTCATTCAAGCTTCTAAAAATGTAAAACCGATTTACTTAAAACAAGGTGAAAAATCAGAGCATAATA
TCGACCCACACGCTTGGCTCAGCTTAGGTAATGGCATTGAATATGTTAAAACCATCAAATCAGCACTTGAAAATGCAGAT
AAAACACACGCAAAAGATTATGACAAACAAGGCACTGAATATTTATCAAAACTTGAAAAATTGAATAAAGAAAGTAAAGA
TAAGTTCAATGACATTCCGAAAGAAAAACGTGTCATGATTACAAGTGAAGGTGCGTTTAAATATTTCGCCCAACAATTTG
ATGTGAAACCAGGATACATTTGGGAAATTAACACAGAAAACCAAGGTACACCTGAACAAATGAAACAAGCTGTTGATTTT
GTTAAAGAGAATCATATTAAAAACTTATTGCTTGAAACAAGTGTGAGTGATAAGAGTATGAAGAGTCTTGGTGAAGAAAC
AGGTGCTAAGATTTACGGTACAGTTTATACGGATTCAATCGGTAAGAAAGGTAGCGATGGGGATTCGTATTATAAGATGA
TGGAATCGAATATTAAGACGATTCATGAAAGCATGCAGTAA

Protein sequence :
MMKRIFAIAILFVLLAACGINKGDESEHKLKIVTTNSILYDMTKNITGDKAEIHSIVPVGQDPHEYEIKPKDVQALTDAD
VIIYNGFNLESGNGWFEKALKQANKSIKDDSVIQASKNVKPIYLKQGEKSEHNIDPHAWLSLGNGIEYVKTIKSALENAD
KTHAKDYDKQGTEYLSKLEKLNKESKDKFNDIPKEKRVMITSEGAFKYFAQQFDVKPGYIWEINTENQGTPEQMKQAVDF
VKENHIKNLLLETSVSDKSMKSLGEETGAKIYGTVYTDSIGKKGSDGDSYYKMMESNIKTIHESMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 6e-56 48
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 4e-56 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPSE_2131 YP_006016208.1 manganese ABC transporter substrate-binding lipoprotein VFG1359 Protein 3e-58 49
SPSE_2131 YP_006016208.1 manganese ABC transporter substrate-binding lipoprotein VFG2157 Protein 7e-63 49
SPSE_2131 YP_006016208.1 manganese ABC transporter substrate-binding lipoprotein VFG2165 Protein 9e-60 48